RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 HBDP02042 147 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 TCRAP04437 139 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 MALP21145 153 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 BCL6BQ8N143 479 aaPredicted RBP6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 LINC00587B1AMM8 73 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 IGLC1P0CG04 106 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 SSBP2P81877 361 aaPredicted RBP6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 SRSF1Q07955 248 aaKnown RBP eCLIP6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 DEFB136Q30KP8 78 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 TSKUQ8WUA8 353 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 VPREB3Q9UKI3 123 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 CD5LO43866 347 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 TOMM40O96008 361 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 COA6Q5JTJ3 125 aaKnown RBP6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 RASL11AQ6T310 242 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 SHISA2Q6UWI4 295 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 FXYD5Q96DB9 178 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 FAM167A-AS1Q96KT0 104 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 V9GYV3 84 aa6.33□□□□□ -1.4
HLA-DMB-262ENST00000498020 CLPSL1A2RUU4 121 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 SLC25A20O43772 301 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 CRYGCP07315 174 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 SIGLEC15Q6ZMC9 328 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 LY6G5BQ8NDX9 201 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 LINC00479Q96M42 142 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 NRN1Q9NPD7 142 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 ARHGAP32A7KAX9 2087 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 A0A087WX48 190 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 SERF1AO75920 110 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 PLNP26678 52 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 LRRC75A-AS1Q8N1F1 130 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 LYPD1Q8N2G4 141 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 UBE2E2Q96LR5 201 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 FLNAP21333 2647 aaKnown RBP6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 TEX15Q9BXT5 2789 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 SNAI2O43623 268 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 CRPP02741 224 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 HOXD3P31249 432 aaPredicted RBP6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 LOXL1Q08397 574 aaPredicted RBP6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 FAM231DQ6ZW35 169 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 RNF182Q8N6D2 247 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 SHANK2-AS3Q9BTD1 123 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 HCFC1P51610 2035 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 K7EN84 100 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 NDUFA3O95167 84 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 C8orf86Q6ZUL3 223 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 C9orf139Q6ZV77 190 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 ATP5L2Q7Z4Y8 100 aa6.32□□□□□ -1.4
HLA-DMB-262ENST00000498020 NPIPB5A8MRT5 1133 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 LINC00614P0C842 121 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 SSBP4Q9BWG4 385 aaPredicted RBP6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 TMEM14CQ9P0S9 112 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 PPIFP30405 207 aaKnown RBP6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 PRSS57Q6UWY2 283 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 MTURNQ8N3F0 131 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 NPBQ8NG41 125 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 C1orf159Q96HA4 380 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 DPM2O94777 84 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 TSPAN13O95857 204 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 RPL15P61313 204 aaKnown RBP6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 MORN5Q5VZ52 161 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 ZNF503Q96F45 646 aa6.31□□□□□ -1.4
HLA-DMB-262ENST00000498020 TEX22C9J3V5 150 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 G3V318 75 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 CD28P10747 220 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 LINC01559Q495D7 138 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 TMEM256Q8N2U0 113 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 TMEM86BQ8N661 226 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 MRPL36Q9P0J6 103 aaKnown RBP6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 PSCAO43653 123 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 CRYGBP07316 175 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 ZNF688P0C7X2 276 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 USMG5Q96IX5 58 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 VGLL1Q99990 258 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 MGAQ8IWI9 3026 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 I3L2K1 104 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 OVOL3O00110 214 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 BLCAPP62952 87 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 EXOC3-AS1Q8N2X6 119 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 IGKV3D-20A0A0C4DH25 116 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 Q0VG73 95 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 PDE6HQ13956 83 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 C10orf126Q8N4M7 172 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 IFI27L1Q96BM0 104 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 PRADC1Q9BSG0 188 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 C1QTNF4Q9BXJ3 329 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 SPCS1Q9Y6A9 102 aa6.3□□□□□ -1.4
HLA-DMB-262ENST00000498020 DMXL1Q9Y485 3027 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 TRBV7-1A0A0A6YYK4 115 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 ZNF138P52744 262 aa6.29□□□□□ -1.4
HLA-DMB-262ENST00000498020 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms