RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF660Q6AZW8 331 aaPredicted RBP3.71□□□□□ -1.82
BRCA1-224ENST00000497488 ZNF880Q6PDB4 577 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 LINC00305Q7Z4B0 112 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 SIGLECL1Q8N7X8 197 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 Q8NAQ8 132 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 PFN4Q8NHR9 129 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 LCN9Q8WX39 176 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 TP53RKQ96S44 253 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 ADAT1Q9BUB4 502 aaKnown RBP3.71□□□□□ -1.82
BRCA1-224ENST00000497488 EPG5Q9HCE0 2579 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 GOLGA4Q13439 2230 aaKnown RBP3.71□□□□□ -1.82
BRCA1-224ENST00000497488 ATMQ13315 3056 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 SDK2Q58EX2 2172 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 DSPP15924 2871 aaKnown RBP3.7□□□□□ -1.82
BRCA1-224ENST00000497488 APC2O95996 2303 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 A0A1B0GU33 70 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 H3BPC8 53 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 COL8A2P25067 703 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 RPL28P46779 137 aaKnown RBP3.7□□□□□ -1.82
BRCA1-224ENST00000497488 HBBP68871 147 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 TMEM244Q5VVB8 128 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 AMMECR1LQ6DCA0 310 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 SPINK14Q6IE38 97 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 DYNAPQ8N1N2 210 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 TMEM203Q969S6 136 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 AP1S3Q96PC3 154 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 CBLN4Q9NTU7 201 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 MRPL16Q9NX20 251 aaKnown RBP3.7□□□□□ -1.82
BRCA1-224ENST00000497488 TPRP12270 2363 aaKnown RBP3.7□□□□□ -1.82
BRCA1-224ENST00000497488 PKD1L2Q7Z442 2459 aa3.7□□□□□ -1.82
BRCA1-224ENST00000497488 UNC13CQ8NB66 2214 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 TRGV10A0A0A0MS01 117 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 C3orf84H3BNL1 204 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 CGAP01215 116 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 IGF2P01344 180 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 MSMBP08118 114 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 DNAH10OSP0CZ25 163 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 ZNF728P0DKX0 622 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 RPS25P62851 125 aaKnown RBP3.69□□□□□ -1.82
BRCA1-224ENST00000497488 FOXF1Q12946 379 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 TMEM14EPQ6UXP3 125 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 LYPD6Q86Y78 171 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 ARL11Q969Q4 196 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 GINS4Q9BRT9 223 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 LINC00470Q9BZP3 86 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 EPDR1Q9UM22 224 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 BAIAP2Q9UQB8 552 aa3.69□□□□□ -1.82
BRCA1-224ENST00000497488 URB1O60287 2271 aaKnown RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 SMG1Q96Q15 3661 aaKnown RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 IGLV3-12A0A075B6K2 115 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 TMEM235A6NFC5 223 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 GGTLC3B5MD39 225 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 K7EM74 188 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 SLC22A1O15245 554 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 GNG7O60262 68 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 CREBL2O60519 120 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 IFNGP01579 166 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 STATHP02808 62 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 TSPAN19P0C672 248 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 ZNF22P17026 224 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 EIF2B2P49770 351 aaKnown RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 SUPT4H1P63272 117 aaKnown RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 EMX2Q04743 252 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 NEDD8Q15843 81 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 IDO2Q6ZQW0 420 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 Q8NDZ9 215 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 TMEM106AQ96A25 262 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 C12orf57Q99622 126 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 NPCDR1Q9BY65 106 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 TXNL4BQ9NX01 149 aaKnown RBP3.68□□□□□ -1.82
BRCA1-224ENST00000497488 FAM215AQ9Y5M1 114 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 BSNQ9UPA5 3926 aa3.68□□□□□ -1.82
BRCA1-224ENST00000497488 CACNA1BQ00975 2339 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 TRAV13-1A0A0B4J241 112 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 H3BMG7 143 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 J3QR89 54 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 K7ERU9 68 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 NDUFB3O43676 98 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 KLF7O75840 302 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-224ENST00000497488 RPL35P42766 123 aaKnown RBP3.67□□□□□ -1.82
BRCA1-224ENST00000497488 DEFB109BQ30KR1 87 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 PDZD9Q8IXQ8 264 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 MMGT1Q8N4V1 131 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 TEX29Q8N6K0 151 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 C3orf56Q8N813 242 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 OR4S1Q8NGB4 309 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 BRK1Q8WUW1 75 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 BOD1L1Q8NFC6 3051 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 KNTC1P50748 2209 aa3.67□□□□□ -1.82
BRCA1-224ENST00000497488 SPENQ96T58 3664 aaKnown RBP3.67□□□□□ -1.82
BRCA1-224ENST00000497488 ACACAQ13085 2346 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 ANKRD11Q6UB99 2663 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-224ENST00000497488 H0YGG7 62 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 K7ERJ3 54 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 HIST1H2BKO60814 126 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 TCL1BO95988 128 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 HIST1H2BJP06899 126 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
BRCA1-224ENST00000497488 C3orf62Q6ZUJ4 267 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms