RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 TCRAP04437 139 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 SCGB1A1P11684 91 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 RPL23P62829 140 aaKnown RBP12.8□□□□□ -0.36
LMNA-216ENST00000496738 Q6ZVH6 145 aa12.8□□□□□ -0.36
LMNA-216ENST00000496738 NIPBLQ6KC79 2804 aaeCLIP12.8□□□□□ -0.36
LMNA-216ENST00000496738 ADARB2-AS1A8MUL3 147 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 CBLN1P23435 193 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 PSG9Q00887 426 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 PSG3Q16557 428 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 IMMP2LQ96T52 175 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 ISLRO14498 428 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 LYPD1Q8N2G4 141 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
LMNA-216ENST00000496738 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 CNN1P51911 297 aaKnown RBP12.78□□□□□ -0.36
LMNA-216ENST00000496738 ODF1Q14990 250 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 CENPWQ5EE01 88 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 SAMD13Q5VXD3 122 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 ADAMTSL5Q6ZMM2 481 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 ASCL2Q99929 193 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
LMNA-216ENST00000496738 FHL3Q13643 280 aa12.77□□□□□ -0.37
LMNA-216ENST00000496738 C16orf92Q96LL3 132 aa12.77□□□□□ -0.37
LMNA-216ENST00000496738 GNG4P50150 75 aa12.77□□□□□ -0.37
LMNA-216ENST00000496738 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.37
LMNA-216ENST00000496738 ZNF253O75346 499 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 UBE2G1P62253 170 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 SLC50A1Q9BRV3 221 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 NRN1Q9NPD7 142 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 PEMTQ9UBM1 199 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 JMJD1CQ15652 2540 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
LMNA-216ENST00000496738 LOC102724200A0A096LPH7 203 aaPredicted RBP12.76□□□□□ -0.37
LMNA-216ENST00000496738 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
LMNA-216ENST00000496738 FOXL1Q12952 345 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 OCC1Q8TAD7 63 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 UQCR10Q9UDW1 63 aa12.76□□□□□ -0.37
LMNA-216ENST00000496738 A0A1B0GUS0 222 aa12.75□□□□□ -0.37
LMNA-216ENST00000496738 CSN1S1P47710 185 aa12.75□□□□□ -0.37
LMNA-216ENST00000496738 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
LMNA-216ENST00000496738 VAMP3Q15836 100 aa12.75□□□□□ -0.37
LMNA-216ENST00000496738 OR4B1Q8NGF8 309 aa12.75□□□□□ -0.37
LMNA-216ENST00000496738 IGF2BP2-AS1Q96M15 143 aa12.75□□□□□ -0.37
LMNA-216ENST00000496738 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 ACTL10Q5JWF8 245 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 C20orf173Q96LM9 149 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 K7EN84 100 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 CSN3P07498 182 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 CTRLP40313 264 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
LMNA-216ENST00000496738 SOCS3O14543 225 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 PRNTQ86SH4 94 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 NIT1Q86X76 327 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 NDUFA11Q86Y39 141 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 C9JCJ5 164 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 PFN1P07737 140 aaKnown RBP12.73□□□□□ -0.37
LMNA-216ENST00000496738 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
LMNA-216ENST00000496738 CRYBA4P53673 196 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 DEFB1P60022 68 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 KRTAP24-1Q3LI83 254 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 MS4A6AQ9H2W1 248 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 MAST4O15021 2626 aa12.73□□□□□ -0.37
LMNA-216ENST00000496738 OVOL1O14753 267 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 HNRNPA3P51991 378 aaKnown RBP12.72□□□□□ -0.37
LMNA-216ENST00000496738 SHISA2Q6UWI4 295 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 PRIMA1Q86XR5 153 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 BAGE2Q86Y30 109 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 FMC1Q96HJ9 113 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 IGLV2-8P01709 118 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 Q86TA4 180 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
LMNA-216ENST00000496738 K7EQM0 130 aa12.71□□□□□ -0.37
LMNA-216ENST00000496738 ERCC8Q13216 396 aa12.71□□□□□ -0.37
LMNA-216ENST00000496738 Q6ZWC4 215 aa12.71□□□□□ -0.37
LMNA-216ENST00000496738 VGLL1Q99990 258 aa12.71□□□□□ -0.37
LMNA-216ENST00000496738 G3V4G9 280 aa12.71□□□□□ -0.38
LMNA-216ENST00000496738 H7BYZ3 331 aa12.71□□□□□ -0.38
LMNA-216ENST00000496738 Q6ZN92 141 aa12.71□□□□□ -0.38
LMNA-216ENST00000496738 Q8TAT8 98 aa12.71□□□□□ -0.38
LMNA-216ENST00000496738 DCANP1Q8TF63 244 aa12.71□□□□□ -0.38
LMNA-216ENST00000496738 MRPS16Q9Y3D3 137 aaKnown RBP12.71□□□□□ -0.38
LMNA-216ENST00000496738 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
LMNA-216ENST00000496738 TMEM75Q8N9X5 138 aa12.7□□□□□ -0.38
LMNA-216ENST00000496738 TRAV26-1A0A087WT03 109 aa12.7□□□□□ -0.38
LMNA-216ENST00000496738 GAGE12BA1L429 117 aa12.7□□□□□ -0.38
LMNA-216ENST00000496738 PSG8Q9UQ74 426 aa12.7□□□□□ -0.38
LMNA-216ENST00000496738 LTAP01374 205 aa12.69□□□□□ -0.38
LMNA-216ENST00000496738 TMEM61Q8N0U2 210 aa12.69□□□□□ -0.38
LMNA-216ENST00000496738 ANAPC16Q96DE5 110 aa12.69□□□□□ -0.38
LMNA-216ENST00000496738 SAP30O75446 220 aa12.69□□□□□ -0.38
LMNA-216ENST00000496738 PF4P02776 101 aa12.69□□□□□ -0.38
LMNA-216ENST00000496738 ZNF688P0C7X2 276 aa12.69□□□□□ -0.38
LMNA-216ENST00000496738 CD33P20138 364 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms