RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 NBL1P41271 181 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 SFTA2Q6UW10 78 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 RNF125Q96EQ8 232 aa5.01□□□□□ -1.61
CCDC6-202ENST00000491922 IGKV2-40A0A087WW87 121 aaPredicted RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 TRAV4A0A0B4J268 109 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 ENSAO43768 121 aaKnown RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 SLC25A20O43772 301 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 IGKV2D-40P01614 121 aaPredicted RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 SLC25A16P16260 332 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 ZNF80P51504 273 aaPredicted RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 TEX36Q5VZQ5 186 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 IL17RELQ6ZVW7 336 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 ZNF491Q8N8L2 437 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 NRACQ8N912 160 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 PRADC1Q9BSG0 188 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 CFAP54Q96N23 3096 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 FAM186AA6NE01 2351 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 TEX22C9J3V5 150 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 CRYGBP07316 175 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 APELAP0DMC3 54 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 PRB4P10163 310 aaPredicted RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 CCL3L1P16619 93 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 EFNA4P52798 201 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 TNFAIP6P98066 277 aaPredicted RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 ANXA2RQ3ZCQ2 193 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 ASCL5Q7RTU5 278 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 ZNF575Q86XF7 245 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 C10orf126Q8N4M7 172 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 OR10J6PQ8NGY7 276 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 SRSF8Q9BRL6 282 aaKnown RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 TMEM126AQ9H061 195 aa5□□□□□ -1.61
CCDC6-202ENST00000491922 CSDC2Q9Y534 153 aaKnown RBP5□□□□□ -1.61
CCDC6-202ENST00000491922 COX6B1P14854 86 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 PRTN3P24158 256 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 GLRXP35754 106 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 ORMDL2Q53FV1 153 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 FAM159AQ6UWV7 190 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 NEXN-AS1Q8NBZ9 246 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 PSMG3-AS1Q96PY0 264 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 SIGLEC9Q9Y336 463 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 MYO15AQ9UKN7 3530 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 CACNA1GO43497 2377 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 IGLV3-9A0A075B6K5 115 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 HLA-DMBP28068 263 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 PLEKHB2Q96CS7 222 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 VKORC1Q9BQB6 163 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 MDFICQ9P1T7 246 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 ONECUT1Q9UBC0 465 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 SPTBN4Q9H254 2564 aa4.99□□□□□ -1.61
CCDC6-202ENST00000491922 CRLF1O75462 422 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 MRPL23Q16540 153 aaKnown RBP4.98□□□□□ -1.61
CCDC6-202ENST00000491922 ZNF672Q499Z4 452 aaPredicted RBP4.98□□□□□ -1.61
CCDC6-202ENST00000491922 MEIG1Q5JSS6 88 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 TMEM200BQ69YZ2 307 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 Q8TAT8 98 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 TOMM6Q96B49 74 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 SLC25A15Q9Y619 301 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 ARFGEF3Q5TH69 2177 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 TRAV8-4A0A0B4J246 113 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 C9JAW5 83 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 K7EIM0 57 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 IGHV1-46P01743 117 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 CFC1P0CG37 223 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 RPL7P18124 248 aaKnown RBP4.98□□□□□ -1.61
CCDC6-202ENST00000491922 ERCC8Q13216 396 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 SMIM2Q9BVW6 85 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 CHD8Q9HCK8 2581 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 EPG5Q9HCE0 2579 aa4.98□□□□□ -1.61
CCDC6-202ENST00000491922 FRYQ5TBA9 3013 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 PLXNB1O43157 2135 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 SVILO95425 2214 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 A0A0J9YY99 117 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 TRGV3P03979 118 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 RPL13AP40429 203 aaKnown RBP4.97□□□□□ -1.61
CCDC6-202ENST00000491922 CXCL12P48061 93 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 HERVK_113P61574 105 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 C15orf53Q8NAA6 179 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 NRGNQ92686 78 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 NBEAQ8NFP9 2946 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 TRIOO75962 3097 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 WDFY3Q8IZQ1 3526 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 IGHV3-72A0A0B4J1Y9 119 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 M0R1B8 84 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 SCGB2A1O75556 95 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 IGHV3-30P01768 117 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 CFIP05156 583 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 P0DMU3 169 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 FAM231AP0DMU4 169 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 FAM231CP0DMU5 169 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 IGHV3-30-5P0DP03 117 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 CNTFRP26992 372 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 PAPPA-AS1Q5QFB9 102 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 ZNF474Q6S9Z5 364 aaPredicted RBP4.97□□□□□ -1.61
CCDC6-202ENST00000491922 Q8N1Y9 231 aa4.97□□□□□ -1.61
CCDC6-202ENST00000491922 C9orf106Q8NAJ2 232 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms