RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZNF833PQ6ZTB9 187 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 MAGOHBQ96A72 148 aaKnown RBP1.53□□□□□ -2.16
ITGB1-214ENST00000488427 TLCD1Q96CP7 247 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 ZC2HC1AQ96GY0 325 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 RETNLBQ9BQ08 111 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 SLC25A31Q9H0C2 315 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 OR2D2Q9H210 308 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 SDHAF2Q9NX18 166 aa1.53□□□□□ -2.16
ITGB1-214ENST00000488427 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 IGKV1D-37A0A075B6S9 117 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 DHRS12A0PJE2 317 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 TVP23AA6NH52 213 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 EFCAB9A8MZ26 197 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 ATP8B1O43520 1251 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 DHFRP00374 187 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 MBP02144 154 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 SAA2P0DJI9 122 aaPredicted RBP1.52□□□□□ -2.17
ITGB1-214ENST00000488427 HLA-DRB4P13762 266 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 HIST1H1BP16401 226 aaKnown RBP1.52□□□□□ -2.17
ITGB1-214ENST00000488427 ZNF22P17026 224 aaPredicted RBP1.52□□□□□ -2.17
ITGB1-214ENST00000488427 SPRR2EP22531 72 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 PSMB9P28065 219 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 TSPOP30536 169 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 SPRR2BP35325 72 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 SPRR2AP35326 72 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 CBX5P45973 191 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 UBE2D1P51668 147 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 NAA20P61599 178 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 C6orf183Q5T699 404 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 TTC9CQ8N5M4 171 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 ATP6V0E2Q8NHE4 81 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 Q8TAT8 98 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 BLNKQ8WV28 456 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 ACOT12Q8WYK0 555 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 LZICQ8WZA0 190 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 ARL6Q9H0F7 186 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 TPT1P8Q9HAU6 139 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 ACOT13Q9NPJ3 140 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 TIMM8BQ9Y5J9 83 aaPredicted RBP1.52□□□□□ -2.17
ITGB1-214ENST00000488427 DNAJC15Q9Y5T4 150 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 HLA-DRB4X5D2U9 266 aa1.52□□□□□ -2.17
ITGB1-214ENST00000488427 TRAV14DV4A0A0A6YYC5 116 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 TRAV8-1A0A0A6YYK1 113 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 A0A1W2PPV4 95 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 ERICH4A6NGS2 130 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 TMEM14DPA8MWL7 114 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 H0YJX3 145 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 RFXANKO14593 260 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 PRM2P04554 102 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 PHBP35232 272 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 KCNJ3P48549 501 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 MRPS15P82914 257 aaKnown RBP1.51□□□□□ -2.17
ITGB1-214ENST00000488427 CDK6Q00534 326 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 FADDQ13158 208 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 PCOTHQ58A44 107 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 LINC01556Q5JQF7 62 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 TESCQ96BS2 214 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 DGCR14Q96DF8 476 aaKnown RBP1.51□□□□□ -2.17
ITGB1-214ENST00000488427 NMNAT3Q96T66 252 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 TXNDC17Q9BRA2 123 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 GPR84Q9NQS5 396 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 PLAC8Q9NZF1 115 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 IER3IP1Q9Y5U9 82 aa1.51□□□□□ -2.17
ITGB1-214ENST00000488427 TRAV8-3A0A0A6YYJ7 113 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 A0A1W2PQL4 384 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-214ENST00000488427 TMEM30CPA0ZSE6 113 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 UBDO15205 165 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 ORC5O43913 435 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 ZNF682O95780 498 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 NAPSAO96009 420 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 APOA2P02652 100 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 DEFA4P12838 97 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 CRHBPP24387 322 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 SNRPD3P62318 126 aaKnown RBP1.5□□□□□ -2.17
ITGB1-214ENST00000488427 MORN2Q502X0 79 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 RPL39P5Q59GN2 51 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 C10orf91Q5T1B1 145 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 TMEM42Q69YG0 159 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 DPPA3Q6W0C5 159 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 DHFR2Q86XF0 187 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 GAPTQ8N292 157 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 OR4D11Q8NGI4 311 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 OR10K1Q8NGX5 313 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 RNF133Q8WVZ7 376 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 BORCS8Q96FH0 119 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 ADTRPQ96IZ2 230 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 GPX7Q96SL4 187 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-214ENST00000488427 GINS3Q9BRX5 216 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 SLC35B3Q9H1N7 401 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 NOP10Q9NPE3 64 aaKnown RBP1.5□□□□□ -2.17
ITGB1-214ENST00000488427 KCNIP2Q9NS61 270 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 TMEM216Q9P0N5 145 aa1.5□□□□□ -2.17
ITGB1-214ENST00000488427 V9GYY5 206 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-214ENST00000488427 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-214ENST00000488427 A6NIN4 97 aa1.49□□□□□ -2.17
ITGB1-214ENST00000488427 CREBL2O60519 120 aaPredicted RBP1.49□□□□□ -2.17
ITGB1-214ENST00000488427 IGHV3-30P01768 117 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms