RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 C7orf33Q8WU49 177 aa2.52□□□□□ -2.01
CNN3-206ENST00000487539 TXNDC17Q9BRA2 123 aa2.52□□□□□ -2.01
CNN3-206ENST00000487539 SLC25A22Q9H936 323 aa2.52□□□□□ -2.01
CNN3-206ENST00000487539 PLGRKTQ9HBL7 147 aa2.52□□□□□ -2.01
CNN3-206ENST00000487539 ANXA10Q9UJ72 324 aa2.52□□□□□ -2.01
CNN3-206ENST00000487539 WBP4O75554 376 aaKnown RBP2.51□□□□□ -2.01
CNN3-206ENST00000487539 IGKV1-5P01602 117 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 ORM1P02763 201 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 CXCL3P19876 107 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 DTYMKP23919 212 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 CNBPP62633 177 aaKnown RBP2.51□□□□□ -2.01
CNN3-206ENST00000487539 CACNG7P62955 275 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 HERV-K104P63124 156 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 C1orf194Q5T5A4 169 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 OR8G2PQ6IF36 304 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 TMPRSS11AQ6ZMR5 421 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 IQCF2Q8IXL9 164 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 MRGPRFQ96AM1 343 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 UBE2WQ96B02 151 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 RPUSD4Q96CM3 377 aaKnown RBP2.51□□□□□ -2.01
CNN3-206ENST00000487539 MRPL53Q96EL3 112 aaKnown RBP2.51□□□□□ -2.01
CNN3-206ENST00000487539 RETNLBQ9BQ08 111 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 KLK12Q9UKR0 248 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 RAB22AQ9UL26 194 aa2.51□□□□□ -2.01
CNN3-206ENST00000487539 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
CNN3-206ENST00000487539 A0A0G2JRQ6 117 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 GGTLC3B5MD39 225 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 INS-IGF2F8WCM5 200 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 EI24O14681 340 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 TAAR5O14804 337 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 GALR1P47211 349 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 OR10A3P58181 314 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 BTN1A1Q13410 526 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 H2BFWTQ7Z2G1 175 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 ZNF664Q8N3J9 261 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 INO80EQ8NBZ0 244 aaPredicted RBP2.5□□□□□ -2.01
CNN3-206ENST00000487539 OR10P1Q8NGE3 313 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 PHYHIPQ92561 330 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 MYCBPQ99417 103 aaPredicted RBP2.5□□□□□ -2.01
CNN3-206ENST00000487539 TSC22D3Q99576 134 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 KIR2DL4Q99706 377 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 C20orf144Q9BQM9 153 aa2.5□□□□□ -2.01
CNN3-206ENST00000487539 ZFP92A6NM28 416 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 H3BTX0 84 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 CORTO00230 105 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 UCHL1P09936 223 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 CRYGAP11844 174 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 PSMB9P28065 219 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 HTR2BP41595 481 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 SUB1P53999 127 aaKnown RBP eCLIP2.49□□□□□ -2.01
CNN3-206ENST00000487539 ERCC8Q13216 396 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 MAJINQ3KP22 176 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 AARDQ4LEZ3 155 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 PRR9Q5T870 116 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 ATRAIDQ6UW56 229 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 ENHOQ6UWT2 76 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 TMEM91Q6ZNR0 172 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 EIF4E3Q8N5X7 224 aaKnown RBP2.49□□□□□ -2.01
CNN3-206ENST00000487539 TMEM75Q8N9X5 138 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 OR10G4Q8NGN3 311 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 RNF185Q96GF1 192 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 URGCP-MRPS24S4R325 110 aa2.49□□□□□ -2.01
CNN3-206ENST00000487539 IGHV3-73A0A0B4J1V6 119 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 SNTNA6NMZ2 147 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 ATP6V1G1O75348 118 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 SCGB2A1O75556 95 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 SLC25A4P12235 298 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 GADD45AP24522 165 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 MAPK3P27361 379 aaPredicted RBP2.48□□□□□ -2.01
CNN3-206ENST00000487539 RNASE4P34096 147 aaKnown RBP2.48□□□□□ -2.01
CNN3-206ENST00000487539 TSPAN5P62079 268 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 RPL19P84098 196 aaKnown RBP2.48□□□□□ -2.01
CNN3-206ENST00000487539 COX6A2Q02221 97 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 KRTAP26-1Q6PEX3 210 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 NIT1Q86X76 327 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 DHRSXQ8N5I4 330 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 SLC25A29Q8N8R3 303 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 CCDC71LQ8N9Z2 235 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 ZNF680Q8NEM1 530 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 Q8TAT8 98 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 RMI2Q96E14 147 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 SDHCQ99643 169 aaPredicted RBP2.48□□□□□ -2.01
CNN3-206ENST00000487539 FXYD6Q9H0Q3 95 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 TMEM222Q9H0R3 208 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 GTSF1LQ9H1H1 148 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 ATG5Q9H1Y0 275 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 MED4Q9NPJ6 270 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
CNN3-206ENST00000487539 IGHV1OR15-1A0A075B7D0 117 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 C7orf71A4D174 169 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 MEIS3P1A6NDR6 274 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 SNRPGP15A8MWD9 76 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 SLC17A3O00476 420 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 SERF1AO75920 110 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 HLA-DQA1P01909 254 aa2.47□□□□□ -2.01
CNN3-206ENST00000487539 PFN1P07737 140 aaKnown RBP2.47□□□□□ -2.01
CNN3-206ENST00000487539 ORM2P19652 201 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms