RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 FABP2P12104 132 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 RAB9AP51151 201 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 TM4SF20Q53R12 229 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 DPF1Q92782 380 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
TNXB-205ENST00000486148 IGHV3-66A0A0C4DH42 116 aa13.54□□□□□ -0.24
TNXB-205ENST00000486148 GAGE12HA6NDE8 117 aa13.54□□□□□ -0.24
TNXB-205ENST00000486148 FBLL1A6NHQ2 334 aaKnown RBP13.54□□□□□ -0.24
TNXB-205ENST00000486148 NPYP01303 97 aa13.54□□□□□ -0.24
TNXB-205ENST00000486148 SAA4P35542 130 aa13.54□□□□□ -0.24
TNXB-205ENST00000486148 UBE2E1P51965 193 aa13.54□□□□□ -0.24
TNXB-205ENST00000486148 SAMD5Q5TGI4 173 aa13.54□□□□□ -0.24
TNXB-205ENST00000486148 G3V318 75 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 BUB3O43684 328 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 ORM1P02763 201 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 PAX8Q06710 450 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 PCP2Q8IVA1 136 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 IGHV3OR16-13A0A075B7E8 117 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 IGHV3-74A0A0B4J1X5 117 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 CKS2P33552 79 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 CD300EQ496F6 205 aaPredicted RBP13.53□□□□□ -0.24
TNXB-205ENST00000486148 CCDC140Q96MF4 163 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 UBTD1Q9HAC8 227 aa13.53□□□□□ -0.24
TNXB-205ENST00000486148 CLPSL1A2RUU4 121 aa13.52□□□□□ -0.24
TNXB-205ENST00000486148 OR9G4Q8NGQ1 327 aa13.52□□□□□ -0.24
TNXB-205ENST00000486148 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.52□□□□□ -0.25
TNXB-205ENST00000486148 TRAV26-1A0A087WT03 109 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 SCGB2A2Q13296 93 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 GAS8-AS1O95177 125 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 IL17RELQ6ZVW7 336 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 OR4X2Q8NGF9 303 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 RNF185Q96GF1 192 aa13.51□□□□□ -0.25
TNXB-205ENST00000486148 FABP5P3A8MUU1 101 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 CKS1BP61024 79 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 HIVEP3Q5T1R4 2406 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 HBDP02042 147 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 PPIFP30405 207 aaKnown RBP13.5□□□□□ -0.25
TNXB-205ENST00000486148 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
TNXB-205ENST00000486148 SIVA1O15304 175 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 LMO4P61968 165 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 CACNG7P62955 275 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 SRSF2Q01130 221 aaKnown RBP13.49□□□□□ -0.25
TNXB-205ENST00000486148 BPESC1Q9GZL8 116 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.49□□□□□ -0.25
TNXB-205ENST00000486148 K7ERJ3 54 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 FXYD2P54710 66 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 SPANXB1Q9NS25 103 aaPredicted RBP13.49□□□□□ -0.25
TNXB-205ENST00000486148 AKAP6Q13023 2319 aa13.49□□□□□ -0.25
TNXB-205ENST00000486148 CENPVL3A0A0U1RRI6 287 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 EFNA4P52798 201 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 CRYBA4P53673 196 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 WFDC2Q14508 124 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 FOXI2Q6ZQN5 318 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 CNFNQ9BYD5 112 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 NMUP48645 174 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 LGALS9BQ3B8N2 356 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 LGALS9CQ6DKI2 356 aa13.48□□□□□ -0.25
TNXB-205ENST00000486148 SMIM13P0DJ93 91 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 LINC01559Q495D7 138 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 WFDC3Q8IUB2 231 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 TRAV8-2A0A0B4J237 113 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 IFI27L1Q96BM0 104 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 C11orf21Q9P2W6 132 aa13.47□□□□□ -0.25
TNXB-205ENST00000486148 IGKV3D-20A0A0C4DH25 116 aa13.46□□□□□ -0.25
TNXB-205ENST00000486148 RBAKDNA6NC62 111 aa13.46□□□□□ -0.25
TNXB-205ENST00000486148 NPFFO15130 113 aa13.46□□□□□ -0.25
TNXB-205ENST00000486148 SPAG8Q99932 426 aaPredicted RBP13.46□□□□□ -0.25
TNXB-205ENST00000486148 SLC50A1Q9BRV3 221 aa13.46□□□□□ -0.25
TNXB-205ENST00000486148 GCSHP23434 173 aa13.46□□□□□ -0.26
TNXB-205ENST00000486148 LY6DQ14210 128 aa13.46□□□□□ -0.26
TNXB-205ENST00000486148 TMEM219Q86XT9 240 aa13.46□□□□□ -0.26
TNXB-205ENST00000486148 PHLDA1Q8WV24 401 aaPredicted RBP13.46□□□□□ -0.26
TNXB-205ENST00000486148 EEF1AKMT3Q96AZ1 226 aa13.46□□□□□ -0.26
TNXB-205ENST00000486148 COL25A1Q9BXS0 654 aaPredicted RBP13.46□□□□□ -0.26
TNXB-205ENST00000486148 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
TNXB-205ENST00000486148 SH2D6Q7Z4S9 175 aa13.45□□□□□ -0.26
TNXB-205ENST00000486148 C5orf56Q8N8D9 126 aa13.45□□□□□ -0.26
TNXB-205ENST00000486148 EVI2AP22794 236 aa13.45□□□□□ -0.26
TNXB-205ENST00000486148 MAP1LC3AQ9H492 121 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 IGHV3OR16-10A0A075B7F0 116 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 K7EMI3 77 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 Q6ZQT7 251 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 C8orf86Q6ZUL3 223 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 METTL26Q96S19 204 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 TTTY13Q9BZ97 58 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 LINC00527Q9UJ94 153 aa13.44□□□□□ -0.26
TNXB-205ENST00000486148 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
TNXB-205ENST00000486148 TCTEX1D4Q5JR98 221 aa13.43□□□□□ -0.26
TNXB-205ENST00000486148 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
TNXB-205ENST00000486148 ATP5G2Q06055 141 aa13.43□□□□□ -0.26
TNXB-205ENST00000486148 DKK2Q9UBU2 259 aa13.43□□□□□ -0.26
TNXB-205ENST00000486148 SPTBN4Q9H254 2564 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms