RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 ELOBQ15370 118 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 FOXI2Q6ZQN5 318 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 Q6ZQT7 251 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 FAM19A4Q96LR4 140 aa10.71□□□□□ -0.69
COL9A1-207ENST00000486080 P01737 135 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 RIPPLY3P57055 190 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 ACTL10Q5JWF8 245 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 FAM162BQ5T6X4 162 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 SHISA2Q6UWI4 295 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 ZFAND2AQ8N6M9 145 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 OR4B1Q8NGF8 309 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 OR2K2Q8NGT1 345 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 LENEPQ9Y5L5 61 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
COL9A1-207ENST00000486080 RPP21Q9H633 154 aaKnown RBP10.7□□□□□ -0.7
COL9A1-207ENST00000486080 IL36BQ9NZH7 164 aa10.7□□□□□ -0.7
COL9A1-207ENST00000486080 CXCL1P09341 107 aa10.69□□□□□ -0.7
COL9A1-207ENST00000486080 TCL1AP56279 114 aa10.69□□□□□ -0.7
COL9A1-207ENST00000486080 CD7P09564 240 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 BEAN1Q3B7T3 259 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 WFDC9Q8NEX5 89 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 H3BMM0 161 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 DUSP14O95147 198 aaKnown RBP10.68□□□□□ -0.7
COL9A1-207ENST00000486080 GPX1P07203 203 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 GZMBP10144 247 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 IGLL1P15814 213 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 S100PP25815 95 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
COL9A1-207ENST00000486080 IMMP2LQ96T52 175 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
COL9A1-207ENST00000486080 TMSB15BA0A087X1C1 80 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 CRISP2P16562 243 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 INSL3P51460 131 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 KCNIP4Q6PIL6 250 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 C11orf21Q9P2W6 132 aa10.67□□□□□ -0.7
COL9A1-207ENST00000486080 TRBV7-9A0A0J9YWB2 115 aa10.66□□□□□ -0.7
COL9A1-207ENST00000486080 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
COL9A1-207ENST00000486080 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
COL9A1-207ENST00000486080 M0R2Z0 102 aa10.66□□□□□ -0.7
COL9A1-207ENST00000486080 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
COL9A1-207ENST00000486080 ZNF575Q86XF7 245 aa10.66□□□□□ -0.7
COL9A1-207ENST00000486080 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
COL9A1-207ENST00000486080 WFDC10AQ9H1F0 79 aa10.66□□□□□ -0.7
COL9A1-207ENST00000486080 PKD1L1Q8TDX9 2849 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 TMEM189A5PLL7 270 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 KLLNB2CW77 178 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 ORM1P02763 201 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 FXYD7P58549 80 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 CT83Q5H943 113 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 GTSF1Q8WW33 167 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 NEU1Q99519 415 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
COL9A1-207ENST00000486080 TRAV12-2A0A075B6T6 113 aa10.65□□□□□ -0.71
COL9A1-207ENST00000486080 A8MTW9 85 aa10.65□□□□□ -0.71
COL9A1-207ENST00000486080 A8MWL6 223 aa10.65□□□□□ -0.71
COL9A1-207ENST00000486080 LEPP41159 167 aa10.65□□□□□ -0.71
COL9A1-207ENST00000486080 MDFIQ99750 246 aa10.65□□□□□ -0.71
COL9A1-207ENST00000486080 PYGO2Q9BRQ0 406 aa10.65□□□□□ -0.71
COL9A1-207ENST00000486080 MCRIP2Q9BUT9 160 aaKnown RBP10.65□□□□□ -0.71
COL9A1-207ENST00000486080 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
COL9A1-207ENST00000486080 SPINK4O60575 86 aa10.64□□□□□ -0.71
COL9A1-207ENST00000486080 FAM210BQ96KR6 192 aa10.64□□□□□ -0.71
COL9A1-207ENST00000486080 IGKV3D-20A0A0C4DH25 116 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 HIGD1CA8MV81 97 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 FRMD6-AS1P0C7T7 363 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 RAB5AP20339 215 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 NUP35Q8NFH5 326 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 CDKN1BP46527 198 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 CMC4P56277 68 aaPredicted RBP10.63□□□□□ -0.71
COL9A1-207ENST00000486080 Q6AWC8 147 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
COL9A1-207ENST00000486080 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 GRIFINA4D1Z8 144 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 TSPOP30536 169 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 STHQ8IWL8 128 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 PGLYRP4Q96LB8 373 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
COL9A1-207ENST00000486080 C7orf71A4D174 169 aa10.61□□□□□ -0.71
COL9A1-207ENST00000486080 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
COL9A1-207ENST00000486080 BTF3L4Q96K17 158 aa10.61□□□□□ -0.71
COL9A1-207ENST00000486080 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
COL9A1-207ENST00000486080 CMYA5Q8N3K9 4069 aa10.61□□□□□ -0.71
COL9A1-207ENST00000486080 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-207ENST00000486080 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms