RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
COL27A1-205ENST00000485397 E5RGE8 158 aa13.11□□□□□ -0.31
COL27A1-205ENST00000485397 H0YIZ8 118 aa13.11□□□□□ -0.31
COL27A1-205ENST00000485397 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
COL27A1-205ENST00000485397 SLAQ13239 276 aa13.11□□□□□ -0.31
COL27A1-205ENST00000485397 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
COL27A1-205ENST00000485397 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
COL27A1-205ENST00000485397 MRPL32Q9BYC8 188 aaKnown RBP13.11□□□□□ -0.31
COL27A1-205ENST00000485397 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
COL27A1-205ENST00000485397 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
COL27A1-205ENST00000485397 RANP62826 216 aaKnown RBP13.1□□□□□ -0.31
COL27A1-205ENST00000485397 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
COL27A1-205ENST00000485397 PGPEP1Q9NXJ5 209 aa13.1□□□□□ -0.31
COL27A1-205ENST00000485397 TRBV7-9A0A0J9YWB2 115 aa13.09□□□□□ -0.31
COL27A1-205ENST00000485397 OR7C2O60412 319 aa13.09□□□□□ -0.31
COL27A1-205ENST00000485397 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
COL27A1-205ENST00000485397 ERVFC1-1P60608 527 aa13.09□□□□□ -0.31
COL27A1-205ENST00000485397 ZNF266Q14584 549 aa13.09□□□□□ -0.31
COL27A1-205ENST00000485397 ZNF479Q96JC4 524 aa13.09□□□□□ -0.31
COL27A1-205ENST00000485397 TRGV4A0A0C4DH28 118 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 EREGO14944 169 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 CSN1S1P47710 185 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 ASAH1Q13510 395 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 NMES1Q9C002 83 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
COL27A1-205ENST00000485397 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
COL27A1-205ENST00000485397 K7EQD1 137 aa13.07□□□□□ -0.32
COL27A1-205ENST00000485397 DNAH10OSP0CZ25 163 aa13.07□□□□□ -0.32
COL27A1-205ENST00000485397 C17orf112F2Z3M2 114 aa13.06□□□□□ -0.32
COL27A1-205ENST00000485397 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL27A1-205ENST00000485397 UBE2L3P68036 154 aaKnown RBP13.06□□□□□ -0.32
COL27A1-205ENST00000485397 TMEM183BQ1AE95 376 aa13.06□□□□□ -0.32
COL27A1-205ENST00000485397 NFE4Q86UQ8 179 aa13.06□□□□□ -0.32
COL27A1-205ENST00000485397 WFDC10BQ8IUB3 73 aa13.06□□□□□ -0.32
COL27A1-205ENST00000485397 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
COL27A1-205ENST00000485397 LY96Q9Y6Y9 160 aa13.06□□□□□ -0.32
COL27A1-205ENST00000485397 A0A087WTM6 91 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 EPM2AB3EWF7 344 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 GYPEP15421 78 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 SRIP30626 198 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 XGP55808 180 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 Q6AWC8 147 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 IQCF2Q8IXL9 164 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 LYPD1Q8N2G4 141 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 OR10G4Q8NGN3 311 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 ENKURQ8TC29 256 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 RASL10AQ92737 203 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 FAT1Q14517 4588 aa13.05□□□□□ -0.32
COL27A1-205ENST00000485397 TRAV9-2A0A087WT02 112 aa13.04□□□□□ -0.32
COL27A1-205ENST00000485397 FAM159AQ6UWV7 190 aa13.04□□□□□ -0.32
COL27A1-205ENST00000485397 ATP5SQ99766 215 aa13.04□□□□□ -0.32
COL27A1-205ENST00000485397 SPXQ9BT56 116 aa13.04□□□□□ -0.32
COL27A1-205ENST00000485397 PTTG2Q9NZH5 202 aa13.04□□□□□ -0.32
COL27A1-205ENST00000485397 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
COL27A1-205ENST00000485397 KRTAP10-1P60331 282 aa13.03□□□□□ -0.32
COL27A1-205ENST00000485397 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
COL27A1-205ENST00000485397 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
COL27A1-205ENST00000485397 HYLS1Q96M11 299 aa13.03□□□□□ -0.32
COL27A1-205ENST00000485397 NAGKQ9UJ70 344 aa13.03□□□□□ -0.32
COL27A1-205ENST00000485397 LENEPQ9Y5L5 61 aa13.03□□□□□ -0.32
COL27A1-205ENST00000485397 CYCSP99999 105 aaKnown RBP13.02□□□□□ -0.33
COL27A1-205ENST00000485397 PPP1R1CQ8WVI7 109 aa13.02□□□□□ -0.33
COL27A1-205ENST00000485397 SMIM3Q9BZL3 60 aa13.02□□□□□ -0.33
COL27A1-205ENST00000485397 MSRB1Q9NZV6 116 aa13.02□□□□□ -0.33
COL27A1-205ENST00000485397 RPH3ALQ9UNE2 315 aa13.02□□□□□ -0.33
COL27A1-205ENST00000485397 HSPB11Q9Y547 144 aa13.02□□□□□ -0.33
COL27A1-205ENST00000485397 INMT-MINDY4F8WBC2 141 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 GNRH2O43555 120 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 ORM1P02763 201 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 EVI2AP22794 236 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 H2BFSP57053 126 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 KHDC3LQ587J8 217 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 LINC00299Q6ZSB3 139 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 S100ZQ8WXG8 99 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
COL27A1-205ENST00000485397 TRAV4A0A0B4J268 109 aa13□□□□□ -0.33
COL27A1-205ENST00000485397 LOC100131303A0A0U1RQF7 123 aa13□□□□□ -0.33
COL27A1-205ENST00000485397 PGPA6NDG6 321 aa13□□□□□ -0.33
COL27A1-205ENST00000485397 TAS2R45P59539 299 aa13□□□□□ -0.33
COL27A1-205ENST00000485397 IFITM3Q01628 133 aa13□□□□□ -0.33
COL27A1-205ENST00000485397 OTORQ9NRC9 128 aa13□□□□□ -0.33
COL27A1-205ENST00000485397 UPK1BO75841 260 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 IFNA5P01569 189 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 TDRG1Q3Y452 100 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 OR4C5Q8NGB2 326 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 TMED6Q8WW62 240 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 TXNDC17Q9BRA2 123 aa12.99□□□□□ -0.33
COL27A1-205ENST00000485397 IGHV3-16A0A0C4DH30 117 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 C9JCJ5 164 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 M0R2P5 195 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 MPC2O95563 127 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 INAFM2P0DMQ5 153 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 GOLT1AQ6ZVE7 132 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 CMTM2Q8TAZ6 248 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
COL27A1-205ENST00000485397 MBD2Q9UBB5 411 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms