RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 SAT2Q96F10 170 aaPredicted RBP3.32□□□□□ -1.88
PTPN4-210ENST00000485247 LINC00477Q96M19 166 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 SLC50A1Q9BRV3 221 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 TMEM222Q9H0R3 208 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 GTSF1LQ9H1H1 148 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 RBKSQ9H477 322 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 SDF2L1Q9HCN8 221 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 NDUFB11Q9NX14 153 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 COPZ2Q9P299 210 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 VAX2Q9UIW0 290 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 PAIP2BQ9ULR5 123 aaKnown RBP3.32□□□□□ -1.88
PTPN4-210ENST00000485247 HIGD1AQ9Y241 93 aa3.32□□□□□ -1.88
PTPN4-210ENST00000485247 TRAV4A0A0B4J268 109 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 KLLNB2CW77 178 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
PTPN4-210ENST00000485247 HYPMO75409 117 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 CDS2O95674 445 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 GPX1P07203 203 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 PRSS1P07477 247 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 CXCL2P19875 107 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 PRSS3P35030 304 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 PRR3P79522 188 aaKnown RBP3.31□□□□□ -1.88
PTPN4-210ENST00000485247 MXD1Q05195 221 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 ERCC8Q13216 396 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 OPCMLQ14982 345 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 CTF1Q16619 201 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 SPINK6Q6UWN8 80 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 DPPA3Q6W0C5 159 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 ACOT7LQ6ZUV0 252 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 SELENOHQ8IZQ5 122 aaKnown RBP3.31□□□□□ -1.88
PTPN4-210ENST00000485247 SLC25A29Q8N8R3 303 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 OR4D10Q8NGI6 311 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 GTSF1Q8WW33 167 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 RASL10AQ92737 203 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 UBE2WQ96B02 151 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 ZNF486Q96H40 463 aaPredicted RBP3.31□□□□□ -1.88
PTPN4-210ENST00000485247 TXNL4BQ9NX01 149 aaKnown RBP3.31□□□□□ -1.88
PTPN4-210ENST00000485247 KLK12Q9UKR0 248 aa3.31□□□□□ -1.88
PTPN4-210ENST00000485247 H7C1H1 209 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 TAAR5O14804 337 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 ATP5HO75947 161 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 IL5P05113 134 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 OR10J4P0C629 311 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 OR4E1P0C645 316 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 CHTF8P0CG12 524 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 SULT1A3P0DMM9 295 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 SULT1A4P0DMN0 295 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 GATA1P15976 413 aaPredicted RBP3.3□□□□□ -1.88
PTPN4-210ENST00000485247 SDC2P34741 201 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
PTPN4-210ENST00000485247 RAB11AP62491 216 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 AKR1C1Q04828 323 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 CIRBPQ14011 172 aaKnown RBP3.3□□□□□ -1.88
PTPN4-210ENST00000485247 MUC21Q5SSG8 566 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 PRR9Q5T870 116 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 GLYATL2Q8WU03 294 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 S100A16Q96FQ6 103 aaKnown RBP3.3□□□□□ -1.88
PTPN4-210ENST00000485247 C2orf50Q96LR7 162 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 PRADC1Q9BSG0 188 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 AGPAT4-IT1Q9H0P7 198 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 DUSP21Q9H596 190 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 TPRKBQ9Y3C4 175 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 URGCP-MRPS24S4R325 110 aa3.3□□□□□ -1.88
PTPN4-210ENST00000485247 TEX13DA0A0J9YY54 714 aaPredicted RBP3.29□□□□□ -1.88
PTPN4-210ENST00000485247 HLA-DQA1P01909 254 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 LINC00869P0C866 280 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 IAPPP10997 89 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 ATP5IP56385 69 aaPredicted RBP3.29□□□□□ -1.88
PTPN4-210ENST00000485247 TMEM183BQ1AE95 376 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 CYP2G1PQ6ZSU1 146 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 PRSS48Q7RTY5 328 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 LHFPL1Q86WI0 220 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 TMEM183AQ8IXX5 376 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 PACRGLQ8N7B6 248 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 OR13C8Q8NGS7 320 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 FAM19A4Q96LR4 140 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 ARL6Q9H0F7 186 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 ARV1Q9H2C2 271 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 OR51M1Q9H341 326 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 CACFD1Q9UGQ2 172 aa3.29□□□□□ -1.88
PTPN4-210ENST00000485247 IGHV3-73A0A0B4J1V6 119 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 TRAV26-2A0A0B4J265 109 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 SMCO3A2RU48 225 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 FAM231BA6NCW3 169 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 FBLL1A6NHQ2 334 aaKnown RBP3.28□□□□□ -1.88
PTPN4-210ENST00000485247 H3BQ15 152 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 M0R3E3 92 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 B3GALNT1O75752 331 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 TNFAIP8O95379 198 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 PLP1P60201 277 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 POLR2GP62487 172 aaKnown RBP eCLIP3.28□□□□□ -1.88
PTPN4-210ENST00000485247 RPL19P84098 196 aaKnown RBP3.28□□□□□ -1.88
PTPN4-210ENST00000485247 ARL16Q0P5N6 197 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 GAGE1Q13065 139 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 GAGE4Q13068 117 aa3.28□□□□□ -1.88
PTPN4-210ENST00000485247 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms