RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
EPHB4-204ENST00000477446 PACRGQ96M98 296 aaPredicted RBP12.7□□□□□ -0.38
EPHB4-204ENST00000477446 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
EPHB4-204ENST00000477446 PSG8Q9UQ74 426 aa12.7□□□□□ -0.38
EPHB4-204ENST00000477446 A0A087X0K7 114 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 CRISP2P16562 243 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 DEFB114Q30KQ6 69 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 DYNLRB2Q8TF09 96 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 U3KQE9 123 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 IGHV3-66A0A0C4DH42 116 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 BUB3O43684 328 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 TCL1AP56279 114 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
EPHB4-204ENST00000477446 AMBPP02760 352 aa12.68□□□□□ -0.38
EPHB4-204ENST00000477446 ESDP10768 282 aa12.68□□□□□ -0.38
EPHB4-204ENST00000477446 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
EPHB4-204ENST00000477446 PYY3Q5JQD4 70 aa12.68□□□□□ -0.38
EPHB4-204ENST00000477446 SAPCD1Q5SSQ6 148 aa12.68□□□□□ -0.38
EPHB4-204ENST00000477446 GBGT1Q8N5D6 347 aa12.68□□□□□ -0.38
EPHB4-204ENST00000477446 NEU1Q99519 415 aa12.68□□□□□ -0.38
EPHB4-204ENST00000477446 A0A1W2PS18 150 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 HIGD1CA8MV81 97 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 OR10J3Q5JRS4 329 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 C16orf54Q6UWD8 224 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
EPHB4-204ENST00000477446 PCP4L1A6NKN8 68 aa12.66□□□□□ -0.38
EPHB4-204ENST00000477446 ZNF785A8K8V0 405 aa12.66□□□□□ -0.38
EPHB4-204ENST00000477446 CA1P00915 261 aaPredicted RBP12.66□□□□□ -0.38
EPHB4-204ENST00000477446 BMI1P35226 326 aa12.66□□□□□ -0.38
EPHB4-204ENST00000477446 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
EPHB4-204ENST00000477446 RAB4BP61018 213 aa12.66□□□□□ -0.38
EPHB4-204ENST00000477446 MRPL54Q6P161 138 aaKnown RBP12.66□□□□□ -0.38
EPHB4-204ENST00000477446 SMAD5-AS1Q9Y6J3 95 aa12.66□□□□□ -0.38
EPHB4-204ENST00000477446 TRAV8-1A0A0A6YYK1 113 aa12.65□□□□□ -0.38
EPHB4-204ENST00000477446 SPINK4O60575 86 aa12.65□□□□□ -0.38
EPHB4-204ENST00000477446 APCSP02743 223 aa12.65□□□□□ -0.38
EPHB4-204ENST00000477446 EGFEM1PQ0D2K5 195 aa12.65□□□□□ -0.38
EPHB4-204ENST00000477446 LINC00322Q6ZN03 302 aaPredicted RBP12.65□□□□□ -0.38
EPHB4-204ENST00000477446 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
EPHB4-204ENST00000477446 TMEM61Q8N0U2 210 aa12.65□□□□□ -0.38
EPHB4-204ENST00000477446 OR2K2Q8NGT1 345 aa12.65□□□□□ -0.38
EPHB4-204ENST00000477446 CT45A10P0DMU9 189 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 JOSD1Q15040 202 aaPredicted RBP12.64□□□□□ -0.39
EPHB4-204ENST00000477446 A0A1B0GXF2 115 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 M0R3E3 92 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 KRTAP10-11P60412 298 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 BEAN1Q3B7T3 259 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 LCN12Q6JVE5 192 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 TCF24Q7RTU0 167 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 GLMPQ8WWB7 406 aa12.64□□□□□ -0.39
EPHB4-204ENST00000477446 MRPL53Q96EL3 112 aaKnown RBP12.64□□□□□ -0.39
EPHB4-204ENST00000477446 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
EPHB4-204ENST00000477446 FRMD6-AS1P0C7T7 363 aa12.63□□□□□ -0.39
EPHB4-204ENST00000477446 HBBP68871 147 aa12.63□□□□□ -0.39
EPHB4-204ENST00000477446 Q6AWC8 147 aa12.63□□□□□ -0.39
EPHB4-204ENST00000477446 OR2D3Q8NGH3 330 aa12.63□□□□□ -0.39
EPHB4-204ENST00000477446 TRAV25A0A0B4J276 109 aa12.62□□□□□ -0.39
EPHB4-204ENST00000477446 A0A1B0GW15 77 aa12.62□□□□□ -0.39
EPHB4-204ENST00000477446 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
EPHB4-204ENST00000477446 ZC2HC1AQ96GY0 325 aa12.62□□□□□ -0.39
EPHB4-204ENST00000477446 SORL1Q92673 2214 aa12.62□□□□□ -0.39
EPHB4-204ENST00000477446 NBEAL1Q6ZS30 2694 aa12.62□□□□□ -0.39
EPHB4-204ENST00000477446 NOTCH1P46531 2555 aa12.61□□□□□ -0.39
EPHB4-204ENST00000477446 IGKV3-7A0A075B6H7 116 aa12.61□□□□□ -0.39
EPHB4-204ENST00000477446 RPL11P62913 178 aaKnown RBP12.61□□□□□ -0.39
EPHB4-204ENST00000477446 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
EPHB4-204ENST00000477446 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
EPHB4-204ENST00000477446 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
EPHB4-204ENST00000477446 GSN-AS1Q9NRJ2 163 aa12.61□□□□□ -0.39
EPHB4-204ENST00000477446 GRIFINA4D1Z8 144 aa12.6□□□□□ -0.39
EPHB4-204ENST00000477446 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
EPHB4-204ENST00000477446 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.6□□□□□ -0.39
EPHB4-204ENST00000477446 ZMAT5Q9UDW3 170 aaKnown RBP12.6□□□□□ -0.39
EPHB4-204ENST00000477446 ZNF256Q9Y2P7 627 aaPredicted RBP12.6□□□□□ -0.39
EPHB4-204ENST00000477446 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
EPHB4-204ENST00000477446 PRR25Q96S07 402 aa12.6□□□□□ -0.39
EPHB4-204ENST00000477446 TP53TG3Q9ULZ0 132 aa12.6□□□□□ -0.39
EPHB4-204ENST00000477446 RIGQ13278 110 aa12.59□□□□□ -0.39
EPHB4-204ENST00000477446 PGLYRP4Q96LB8 373 aa12.59□□□□□ -0.39
EPHB4-204ENST00000477446 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
EPHB4-204ENST00000477446 MS4A6AQ9H2W1 248 aa12.59□□□□□ -0.39
EPHB4-204ENST00000477446 SERF1AO75920 110 aa12.58□□□□□ -0.4
EPHB4-204ENST00000477446 SRIP30626 198 aa12.58□□□□□ -0.4
EPHB4-204ENST00000477446 TFPI2P48307 235 aa12.58□□□□□ -0.4
EPHB4-204ENST00000477446 CRIP1P50238 77 aa12.58□□□□□ -0.4
EPHB4-204ENST00000477446 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 PRB2P02812 416 aaPredicted RBP12.57□□□□□ -0.4
EPHB4-204ENST00000477446 GZMBP10144 247 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 CAMPP49913 170 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 SLAQ13239 276 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 IQCJQ1A5X6 159 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 KIAA1644Q3SXP7 199 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 GDF5OSQ5U4N7 250 aa12.57□□□□□ -0.4
EPHB4-204ENST00000477446 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms