RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 RAB37Q96AX2 223 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 GGACTQ9BVM4 153 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 COMMD3Q9UBI1 195 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 LY96Q9Y6Y9 160 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 TCOF1Q13428 1488 aaKnown RBP0.96□□□□□ -2.26
VPS8-220ENST00000469713 KIF13AQ9H1H9 1805 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 FANCMQ8IYD8 2048 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 SPTBN4Q9H254 2564 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 TNRC6AQ8NDV7 1962 aaKnown RBP0.96□□□□□ -2.26
VPS8-220ENST00000469713 KDM5CP41229 1560 aa0.96□□□□□ -2.26
VPS8-220ENST00000469713 MYH13Q9UKX3 1938 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 TTC28Q96AY4 2481 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 TRPM7Q96QT4 1865 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 SPEF2Q9C093 1822 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 A0A087WSZ3 146 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 TRAV27A0A087WT01 109 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 OR2T8A6NH00 312 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 C5orf67F2Z3F1 127 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 M0R233 179 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 M0R2N4 97 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 UQCRQO14949 82 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 HBDP02042 147 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 CD14P08571 375 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 TPT1P13693 172 aaKnown RBP0.95□□□□□ -2.26
VPS8-220ENST00000469713 FABP4P15090 132 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 NCS1P62166 190 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 SNRPD3P62318 126 aaKnown RBP0.95□□□□□ -2.26
VPS8-220ENST00000469713 BLCAPP62952 87 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 CTAGE3PQ8IX95 158 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 OR4B1Q8NGF8 309 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 CCL4L1Q8NHW4 92 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 LINC00526Q96FQ7 95 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 HYLS1Q96M11 299 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 CGREF1Q99674 301 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 NABP2Q9BQ15 211 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 LINC00470Q9BZP3 86 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 CDC42SE1Q9NRR8 79 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 OVOS2A0A0J9YW53 1432 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 OVOS2Q6IE36 1432 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 MYLKQ15746 1914 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 TENM4Q6N022 2769 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 COL24A1Q17RW2 1714 aa0.95□□□□□ -2.26
VPS8-220ENST00000469713 ROCK2O75116 1388 aaKnown RBP0.95□□□□□ -2.26
VPS8-220ENST00000469713 BDP1A6H8Y1 2624 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 ABCA12Q86UK0 2595 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.94□□□□□ -2.26
VPS8-220ENST00000469713 hDV103S1A0JD37 113 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 ZNF736B4DX44 427 aaPredicted RBP0.94□□□□□ -2.26
VPS8-220ENST00000469713 E7EUB6 86 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 J3QR89 54 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 NPFFO15130 113 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 SMIM24O75264 130 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 IGF2P01344 180 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 CD2P06729 351 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 TSPAN19P0C672 248 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 HLA-DRB4P13762 266 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 DSCR4P56555 118 aaPredicted RBP0.94□□□□□ -2.26
VPS8-220ENST00000469713 COPZ1P61923 177 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 MRPS36P82909 103 aaKnown RBP0.94□□□□□ -2.26
VPS8-220ENST00000469713 QRFPP83859 136 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 CDK6Q00534 326 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 KRTAP26-1Q6PEX3 210 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 TMEM91Q6ZNR0 172 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 OR5D14Q8NGL3 314 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 Q8TAT8 98 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 CLEC2BQ92478 149 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 MCEEQ96PE7 176 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 OR4C12Q96R67 309 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 C2orf88Q9BSF0 95 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 TPRKBQ9Y3C4 175 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 DNAJC15Q9Y5T4 150 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 HLA-DRB4X5D2U9 266 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 DISP2A7MBM2 1401 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 PTPRGP23470 1445 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 PRG4Q92954 1404 aaPredicted RBP0.94□□□□□ -2.26
VPS8-220ENST00000469713 USP54Q70EL1 1684 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 ZNF292O60281 2723 aa0.94□□□□□ -2.26
VPS8-220ENST00000469713 GCN1Q92616 2671 aaKnown RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 HELZP42694 1942 aaKnown RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 COL1A1P02452 1464 aaPredicted RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 ERCC6Q03468 1493 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 TRAV10A0A0B4J240 114 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 LOC107984156A0A0G2JMH3 177 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 LOC100130705A0A1B0GUX0 176 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 TCRBV4S1A1TA0A5B7 111 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 C9orf170A2RU37 121 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 ZNF670-ZNF695F2Z2N8 137 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 C17orf112F2Z3M2 114 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 INE1O15225 51 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 LYRM1O43325 122 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 APOC1P02654 83 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 CD3DP04234 171 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 ZNF25P17030 456 aaPredicted RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 SELENOWP63302 87 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 CCSMST1Q4G0I0 132 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 CLLU1Q5K131 121 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 GDF5OSQ5U4N7 250 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 HAGHLQ6PII5 290 aaPredicted RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 GLIPR1L1Q6UWM5 242 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms