RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
GPC1-208ENST00000469694 ZMAT4Q9H898 229 aa10.84□□□□□ -0.67
GPC1-208ENST00000469694 UBR5O95071 2799 aaPredicted RBP10.84□□□□□ -0.67
GPC1-208ENST00000469694 CRIP1P50238 77 aa10.84□□□□□ -0.67
GPC1-208ENST00000469694 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 WFDC3Q8IUB2 231 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 ZNF479Q96JC4 524 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 PRTN3P24158 256 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 INSL3P51460 131 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 ZNF502Q8TBZ5 544 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 ASCL2Q99929 193 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 DPM3Q9P2X0 92 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
GPC1-208ENST00000469694 MRPL51Q4U2R6 128 aaKnown RBP10.83□□□□□ -0.68
GPC1-208ENST00000469694 GAGE13Q4V321 117 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 OR11H6Q8NGC7 330 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
GPC1-208ENST00000469694 PRO0461Q9UI25 63 aa10.83□□□□□ -0.68
GPC1-208ENST00000469694 USP9YO00507 2555 aaPredicted RBP10.82□□□□□ -0.68
GPC1-208ENST00000469694 ABCA12Q86UK0 2595 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 LMO4P61968 165 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 HES1Q14469 280 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 PLGLAQ15195 96 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 PPP1R27Q86WC6 154 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 TMEM75Q8N9X5 138 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 PTPN13Q12923 2485 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 K7EMI3 77 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 ODF1Q14990 250 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 ZNF843Q8N446 348 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 TMEM14CQ9P0S9 112 aa10.82□□□□□ -0.68
GPC1-208ENST00000469694 CHD6Q8TD26 2715 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 M0R1W7 72 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 AMTNQ6UX39 209 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 CCL19Q99731 98 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 CRYGBP07316 175 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 PSG8Q9UQ74 426 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 HIGD1AQ9Y241 93 aa10.81□□□□□ -0.68
GPC1-208ENST00000469694 NPIPB5A8MRT5 1133 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 NPYP01303 97 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 EVI2AP22794 236 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 CFHR4Q92496 578 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 RPL27AP46776 148 aaKnown RBP10.8□□□□□ -0.68
GPC1-208ENST00000469694 PVRIGQ6DKI7 326 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 TTC9CQ8N5M4 171 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 C20orf78Q9BR46 151 aa10.8□□□□□ -0.68
GPC1-208ENST00000469694 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 CKS2P33552 79 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 SIRPDQ9H106 197 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 IGHV3OR16-10A0A075B7F0 116 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 IGKCP01834 107 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 ZNF418Q8TF45 676 aaPredicted RBP10.79□□□□□ -0.68
GPC1-208ENST00000469694 SLC25A39Q9BZJ4 359 aaPredicted RBP10.79□□□□□ -0.68
GPC1-208ENST00000469694 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 GTSCR1Q86UQ5 136 aa10.79□□□□□ -0.68
GPC1-208ENST00000469694 IGHV4-61A0A0C4DH41 118 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 TAL2Q16559 108 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 TEX22C9J3V5 150 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 CNIH1O95406 144 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 LYZP61626 148 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 KLF17Q5JT82 389 aaPredicted RBP10.78□□□□□ -0.68
GPC1-208ENST00000469694 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
GPC1-208ENST00000469694 A0A1B0GWB2 263 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 TSPAN13O95857 204 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 PRSS1P07477 247 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 ATP5J2P56134 94 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 ZC2HC1BQ5TFG8 222 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 C17orf77Q96MU5 243 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 CDIP1Q9H305 208 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 TRBV19A0A075B6N1 114 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 TMSB15BA0A087X1C1 80 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 LINC01546A6NGU7 62 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 NCBP2LA6PVI3 153 aaKnown RBP10.77□□□□□ -0.69
GPC1-208ENST00000469694 FOXI1Q12951 378 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 RRN3P1Q2M238 152 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 TMEM190Q8WZ59 177 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 CYSLTR1Q9Y271 337 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 S4R3C0 116 aa10.77□□□□□ -0.69
GPC1-208ENST00000469694 APOMO95445 188 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 FCER1GP30273 86 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 LEPP41159 167 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 IGHV4-30-2A0A087WSY4 118 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 NBR2O15453 112 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 SIGLEC15Q6ZMC9 328 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 SYT8Q8NBV8 401 aa10.76□□□□□ -0.69
GPC1-208ENST00000469694 ANKRD17O75179 2603 aaKnown RBP10.75□□□□□ -0.69
GPC1-208ENST00000469694 DPM2O94777 84 aa10.75□□□□□ -0.69
GPC1-208ENST00000469694 SAA4P35542 130 aa10.75□□□□□ -0.69
GPC1-208ENST00000469694 C5orf64Q2M2E5 130 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms