RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 TRAPPC2LQ9UL33 140 aa0.39□□□□□ -2.35
ATG3-204ENST00000467275 APCP25054 2843 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 KMT2DO14686 5537 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 LOC285556D6RIA3 1793 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 GYPBP06028 91 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 SLC25A4P12235 298 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 DNAJB13P59910 316 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 CSAG1Q6PB30 78 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 TCTEX1D1Q8N7M0 179 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 C19orf12Q9NSK7 152 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 FGD6Q6ZV73 1430 aa0.38□□□□□ -2.35
ATG3-204ENST00000467275 A2MP01023 1474 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.37□□□□□ -2.35
ATG3-204ENST00000467275 LOC107984156A0A0G2JMH3 177 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 LOC107986453A0A1B0GWG9 222 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 A0A1W2PPB8 328 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 A0A1W2PRS3 328 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 PRORSD1PA6NEY8 169 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 KIR3DP1A8MWS1 328 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 SULT1C4O75897 302 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 RPL22P35268 128 aaKnown RBP0.37□□□□□ -2.35
ATG3-204ENST00000467275 BLCAPP62952 87 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 C10orf99Q6UWK7 81 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 Q6ZS92 163 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 Q86TA4 180 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 ARL17AQ8IVW1 177 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 OR51A4Q8NGJ6 313 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 SELENOSQ9BQE4 189 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 DSPPQ9NZW4 1301 aa0.37□□□□□ -2.35
ATG3-204ENST00000467275 AFDNP55196 1824 aaKnown RBP0.36□□□□□ -2.35
ATG3-204ENST00000467275 ARL5CA6NH57 179 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 HBDP02042 147 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 PRH1P02810 166 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 SPINT3P49223 89 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 ZNF137PP52743 207 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 SAMD13Q5VXD3 122 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 XAF1Q6GPH4 301 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 SMIM15Q7Z3B0 74 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 DEFB132Q7Z7B7 95 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 OR5A2Q8NGI9 324 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 AP1S3Q96PC3 154 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 JPT1Q9UK76 154 aa0.36□□□□□ -2.35
ATG3-204ENST00000467275 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
ATG3-204ENST00000467275 HELZP42694 1942 aaKnown RBP0.36□□□□□ -2.35
ATG3-204ENST00000467275 IFITM5A6NNB3 132 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 BBIP1A8MTZ0 92 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 M0QZK8 103 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 S100GP29377 79 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 CAV3P56539 151 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 B2MP61769 119 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 SNRPD3P62318 126 aaKnown RBP0.35□□□□□ -2.35
ATG3-204ENST00000467275 RPS28P62857 69 aaKnown RBP0.35□□□□□ -2.35
ATG3-204ENST00000467275 QRFPP83859 136 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 C3orf62Q6ZUJ4 267 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 TMEM35BQ8NCS4 154 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 BRK1Q8WUW1 75 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 MRPL35Q9NZE8 188 aaKnown RBP0.35□□□□□ -2.35
ATG3-204ENST00000467275 COMMD3Q9UBI1 195 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 NDUFAF1Q9Y375 327 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 TNCP24821 2201 aa0.35□□□□□ -2.35
ATG3-204ENST00000467275 TMEM189A5PLL7 270 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 IGF2P01344 180 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 NBEAP1P0C6P0 100 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 ETV6P41212 452 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 GTF2A1P52655 376 aaPredicted RBP0.34□□□□□ -2.36
ATG3-204ENST00000467275 FXYD6P3P58550 94 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 ASB16-AS1Q495Z4 193 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 BCORL1Q5H9F3 1711 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 C6orf52Q5T4I8 152 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 LINC00208Q96KT6 92 aa0.34□□□□□ -2.36
ATG3-204ENST00000467275 FAM103A1Q9BTL3 118 aaKnown RBP0.34□□□□□ -2.36
ATG3-204ENST00000467275 MRPL36Q9P0J6 103 aaKnown RBP0.34□□□□□ -2.36
ATG3-204ENST00000467275 MED23Q9ULK4 1368 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 NBDYA0A0U1RRE5 68 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 UQCRQO14949 82 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 EDF1O60869 148 aaKnown RBP0.33□□□□□ -2.36
ATG3-204ENST00000467275 SLC25A5P05141 298 aaKnown RBP0.33□□□□□ -2.36
ATG3-204ENST00000467275 EVI2AP22794 236 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 SPINK7P58062 85 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 LSM3P62310 102 aaKnown RBP0.33□□□□□ -2.36
ATG3-204ENST00000467275 ESPL1Q14674 2120 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 FXYD3Q14802 87 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 RHOHQ15669 191 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 GLYATL3Q5SZD4 288 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 Q5XG85 94 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 SKA2Q8WVK7 121 aaPredicted RBP0.33□□□□□ -2.36
ATG3-204ENST00000467275 SMR3AQ99954 134 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 PLAC8Q9NZF1 115 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 GINS2Q9Y248 185 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 WDR97A6NE52 1622 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 MAST4O15021 2626 aa0.33□□□□□ -2.36
ATG3-204ENST00000467275 ANK2Q01484 3957 aa0.32□□□□□ -2.36
ATG3-204ENST00000467275 KIDINS220Q9ULH0 1771 aa0.32□□□□□ -2.36
ATG3-204ENST00000467275 LOC101927531A0A1B0GV80 90 aa0.32□□□□□ -2.36
ATG3-204ENST00000467275 TMEM30CPA0ZSE6 113 aa0.32□□□□□ -2.36
ATG3-204ENST00000467275 TSTD3H0UI37 97 aa0.32□□□□□ -2.36
ATG3-204ENST00000467275 H0YJX3 145 aa0.32□□□□□ -2.36
ATG3-204ENST00000467275 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms