RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 OR11H1Q8NG94 326 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 OR11H2Q8NH07 326 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 KLRD1Q13241 179 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 ZFAND3Q9H8U3 227 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 ZDBF2Q9HCK1 2354 aa11.98□□□□□ -0.49
CHD1L-205ENST00000467213 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
CHD1L-205ENST00000467213 LYRM7Q5U5X0 104 aa11.97□□□□□ -0.49
CHD1L-205ENST00000467213 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
CHD1L-205ENST00000467213 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
CHD1L-205ENST00000467213 M0R381 172 aa11.97□□□□□ -0.49
CHD1L-205ENST00000467213 GATA1P15976 413 aaPredicted RBP11.97□□□□□ -0.49
CHD1L-205ENST00000467213 CFAP126Q5VTH2 177 aa11.97□□□□□ -0.49
CHD1L-205ENST00000467213 PRTN3P24158 256 aa11.96□□□□□ -0.49
CHD1L-205ENST00000467213 UBE2D1P51668 147 aa11.96□□□□□ -0.49
CHD1L-205ENST00000467213 DLX1P56177 255 aa11.96□□□□□ -0.49
CHD1L-205ENST00000467213 ERCC8Q13216 396 aa11.96□□□□□ -0.49
CHD1L-205ENST00000467213 MED14OSP0DP75 135 aa11.96□□□□□ -0.49
CHD1L-205ENST00000467213 FOXI1Q12951 378 aa11.96□□□□□ -0.49
CHD1L-205ENST00000467213 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.49
CHD1L-205ENST00000467213 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.5
CHD1L-205ENST00000467213 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.5
CHD1L-205ENST00000467213 PPP1R17O96001 155 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 TRGV3P03979 118 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 HLA-DMBP28068 263 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 SH2D6Q7Z4S9 175 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
CHD1L-205ENST00000467213 AGPAT4-IT1Q9H0P7 198 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 MRPL16Q9NX20 251 aaKnown RBP11.95□□□□□ -0.5
CHD1L-205ENST00000467213 C11orf21Q9P2W6 132 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 NDPQ00604 133 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
CHD1L-205ENST00000467213 PRAC2D3DTV9 90 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 CD3EP07766 207 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 RPL32P62910 135 aaKnown RBP11.94□□□□□ -0.5
CHD1L-205ENST00000467213 TMEM78Q5T7P6 136 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 SVILO95425 2214 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 LGALS1P09382 135 aaKnown RBP11.94□□□□□ -0.5
CHD1L-205ENST00000467213 UBE2D3P61077 147 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 UBE2D2P62837 147 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 CYSLTR1Q9Y271 337 aa11.94□□□□□ -0.5
CHD1L-205ENST00000467213 M0QXV9 152 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 GOSR1O95249 250 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 APOMO95445 188 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 CKS1BP61024 79 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 SBSPONQ8IVN8 264 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 S4R3C0 116 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 U3KQE9 123 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 POM121L12Q8N7R1 296 aa11.93□□□□□ -0.5
CHD1L-205ENST00000467213 ABCA1O95477 2261 aa11.92□□□□□ -0.5
CHD1L-205ENST00000467213 COX6B1P14854 86 aa11.92□□□□□ -0.5
CHD1L-205ENST00000467213 DEFB124Q8NES8 71 aa11.92□□□□□ -0.5
CHD1L-205ENST00000467213 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
CHD1L-205ENST00000467213 AGRNO00468 2067 aa11.92□□□□□ -0.5
CHD1L-205ENST00000467213 TNRC18O15417 2968 aaPredicted RBP11.92□□□□□ -0.5
CHD1L-205ENST00000467213 RAXQ9Y2V3 346 aa11.92□□□□□ -0.5
CHD1L-205ENST00000467213 TRBV20-1A0A075B6N2 111 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 TRAV8-2A0A0B4J237 113 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 PRB4P10163 310 aaPredicted RBP11.91□□□□□ -0.5
CHD1L-205ENST00000467213 SUMO2P61956 95 aaKnown RBP11.91□□□□□ -0.5
CHD1L-205ENST00000467213 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 IGHV7-81A0A0B4J1V7 117 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 CLPSL1A2RUU4 121 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 SPANXN1Q5VSR9 72 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 IGFL4Q6B9Z1 124 aa11.91□□□□□ -0.5
CHD1L-205ENST00000467213 SPAARA0A1B0GVQ0 90 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 CRYBA4P53673 196 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 AMTNQ6UX39 209 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 CDIP1Q9H305 208 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 GPR179Q6PRD1 2367 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 EFNA4P52798 201 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 HES1Q14469 280 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 PGPEP1Q9NXJ5 209 aa11.9□□□□□ -0.5
CHD1L-205ENST00000467213 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.51
CHD1L-205ENST00000467213 SPENQ96T58 3664 aaKnown RBP11.9□□□□□ -0.51
CHD1L-205ENST00000467213 PPIFP30405 207 aaKnown RBP11.9□□□□□ -0.51
CHD1L-205ENST00000467213 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.51
CHD1L-205ENST00000467213 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.51
CHD1L-205ENST00000467213 CD7P09564 240 aa11.89□□□□□ -0.51
CHD1L-205ENST00000467213 SCGB2A2Q13296 93 aa11.89□□□□□ -0.51
CHD1L-205ENST00000467213 PPDPFLQ8WWR9 84 aa11.89□□□□□ -0.51
CHD1L-205ENST00000467213 BAALCQ8WXS3 180 aa11.89□□□□□ -0.51
CHD1L-205ENST00000467213 DPH3P1Q9H4G8 78 aa11.89□□□□□ -0.51
CHD1L-205ENST00000467213 TRBV7-9A0A0J9YWB2 115 aa11.89□□□□□ -0.51
CHD1L-205ENST00000467213 PRADC1Q9BSG0 188 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 MSRB2Q9Y3D2 182 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 TRBV7-1A0A0A6YYK4 115 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.88□□□□□ -0.51
CHD1L-205ENST00000467213 VMO1Q7Z5L0 202 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 Q8N9W7 124 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 RASL10AQ92737 203 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
CHD1L-205ENST00000467213 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms