RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 NDFIP1Q9BT67 221 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 TUBA4BQ9H853 241 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
COL4A1-202ENST00000467182 CXorf65A6NEN9 183 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 H3BMM0 161 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 SH2D1AO60880 128 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
COL4A1-202ENST00000467182 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
COL4A1-202ENST00000467182 CD7P09564 240 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 KIR3DS1Q14943 382 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 Q6ZQT7 251 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 FAM110AQ9BQ89 295 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 MCRIP2Q9BUT9 160 aaKnown RBP9.61□□□□□ -0.87
COL4A1-202ENST00000467182 SMCO4Q9NRQ5 59 aa9.61□□□□□ -0.87
COL4A1-202ENST00000467182 AGRNO00468 2067 aa9.6□□□□□ -0.87
COL4A1-202ENST00000467182 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
COL4A1-202ENST00000467182 KLLNB2CW77 178 aa9.6□□□□□ -0.87
COL4A1-202ENST00000467182 GATCO43716 136 aaKnown RBP9.6□□□□□ -0.87
COL4A1-202ENST00000467182 ACTL10Q5JWF8 245 aa9.6□□□□□ -0.87
COL4A1-202ENST00000467182 C15orf54Q8N8G6 183 aa9.6□□□□□ -0.87
COL4A1-202ENST00000467182 SORL1Q92673 2214 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
COL4A1-202ENST00000467182 CMC4P56277 68 aaPredicted RBP9.59□□□□□ -0.87
COL4A1-202ENST00000467182 ELOBQ15370 118 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 CT83Q5H943 113 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 FAM162BQ5T6X4 162 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 IMMP2LQ96T52 175 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 WFDC10AQ9H1F0 79 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 RPP21Q9H633 154 aaKnown RBP9.59□□□□□ -0.87
COL4A1-202ENST00000467182 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
COL4A1-202ENST00000467182 COLCA2A8K830 154 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
COL4A1-202ENST00000467182 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 P01737 135 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 RPL19P84098 196 aaKnown RBP9.58□□□□□ -0.88
COL4A1-202ENST00000467182 Q6AWC8 147 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
COL4A1-202ENST00000467182 OR4B1Q8NGF8 309 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
COL4A1-202ENST00000467182 SMIM27A0A1W2PRY6 76 aa9.57□□□□□ -0.88
COL4A1-202ENST00000467182 J3KRW8 73 aa9.57□□□□□ -0.88
COL4A1-202ENST00000467182 CXCL1P09341 107 aa9.57□□□□□ -0.88
COL4A1-202ENST00000467182 LEPP41159 167 aa9.57□□□□□ -0.88
COL4A1-202ENST00000467182 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
COL4A1-202ENST00000467182 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
COL4A1-202ENST00000467182 URGCP-MRPS24S4R325 110 aa9.57□□□□□ -0.88
COL4A1-202ENST00000467182 TGIF2-C20orf24A0A0A6YYL0 155 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 IGKV3D-20A0A0C4DH25 116 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 M0R2Z0 102 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 CRXO43186 299 aaPredicted RBP9.56□□□□□ -0.88
COL4A1-202ENST00000467182 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
COL4A1-202ENST00000467182 GPX1P07203 203 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 RNASE4P34096 147 aaKnown RBP9.56□□□□□ -0.88
COL4A1-202ENST00000467182 FAM3BP58499 235 aaPredicted RBP9.56□□□□□ -0.88
COL4A1-202ENST00000467182 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 PRR31Q5SQ13 230 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 GFI1BQ5VTD9 330 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 TSKUQ8WUA8 353 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 GTSF1Q8WW33 167 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 COL6A5A8TX70 2615 aa9.56□□□□□ -0.88
COL4A1-202ENST00000467182 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
COL4A1-202ENST00000467182 TRAV21A0A0B4J279 112 aa9.55□□□□□ -0.88
COL4A1-202ENST00000467182 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
COL4A1-202ENST00000467182 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
COL4A1-202ENST00000467182 GZMBP10144 247 aa9.55□□□□□ -0.88
COL4A1-202ENST00000467182 CDKN1BP46527 198 aa9.55□□□□□ -0.88
COL4A1-202ENST00000467182 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
COL4A1-202ENST00000467182 Q8N1Y9 231 aa9.55□□□□□ -0.88
COL4A1-202ENST00000467182 TRBV24-1A0A075B6N3 115 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 C7orf71A4D174 169 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 TMEM189A5PLL7 270 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 A8MWL6 223 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 TSPOP30536 169 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 FOXA3P55318 350 aaPredicted RBP9.54□□□□□ -0.88
COL4A1-202ENST00000467182 TCL1AP56279 114 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 FXYD7P58549 80 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 OXLD1Q5BKU9 147 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 NEU1Q99519 415 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 GFRA4Q9GZZ7 299 aa9.54□□□□□ -0.88
COL4A1-202ENST00000467182 TMSB15BA0A087X1C1 80 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 FAM231BA6NCW3 169 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 S100PP25815 95 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 EGFEM1PQ0D2K5 195 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 KCNIP4Q6PIL6 250 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 STHQ8IWL8 128 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 DEFB125Q8N687 156 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 NUP35Q8NFH5 326 aa9.53□□□□□ -0.88
COL4A1-202ENST00000467182 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 A0A1W2PPQ1 181 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 ORM1P02763 201 aa9.52□□□□□ -0.89
COL4A1-202ENST00000467182 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms