RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TRAPPC2P0DI81 140 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TRAPPC2BP0DI82 140 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 PRB4P10163 310 aaPredicted RBP1.6□□□□□ -2.15
XRN1-206ENST00000467077 MYL12AP19105 171 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 RAB5AP20339 215 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 NPPCP23582 126 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 EIF2B2P49770 351 aaKnown RBP1.6□□□□□ -2.15
XRN1-206ENST00000467077 RPS11P62280 158 aaKnown RBP eCLIP1.6□□□□□ -2.15
XRN1-206ENST00000467077 SNRPD3P62318 126 aaKnown RBP1.6□□□□□ -2.15
XRN1-206ENST00000467077 RPL30P62888 115 aaKnown RBP1.6□□□□□ -2.15
XRN1-206ENST00000467077 WT1-ASQ06250 92 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 DHRS2Q13268 280 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 SSX1Q16384 188 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 RBM48Q5RL73 367 aaKnown RBP1.6□□□□□ -2.15
XRN1-206ENST00000467077 TMEM69Q5SWH9 247 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 ZNF773Q6PK81 442 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TOMM20LQ6UXN7 152 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 RXFP4Q8TDU9 374 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 DCANP1Q8TF63 244 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 DERL3Q96Q80 235 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 METTL26Q96S19 204 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TMEM208Q9BTX3 173 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 LPAR5Q9H1C0 372 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 MCUBQ9NWR8 336 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 BET1LQ9NYM9 111 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 TAS2R8Q9NYW2 309 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 ARL2BPQ9Y2Y0 163 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 RBMX2Q9Y388 322 aaKnown RBP1.6□□□□□ -2.15
XRN1-206ENST00000467077 CBY1Q9Y3M2 126 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 LRP1BQ9NZR2 4599 aa1.6□□□□□ -2.15
XRN1-206ENST00000467077 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 A0A087WTM6 91 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 TMEM14DPA8MWL7 114 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 H3BMM0 161 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 I3L2K1 104 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 SULT1C2O00338 296 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 UPK2O00526 184 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 GYG2O15488 501 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 ATP8B1O43520 1251 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 SNAPC5O75971 98 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 PRM2P04554 102 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 ATP5G1P05496 136 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 CDK1P06493 297 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 HLA-DRB4P13762 266 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 NQO2P16083 231 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 NFYAP23511 347 aaPredicted RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 ASIPP42127 132 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 ATP5G3P48201 142 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 AP2S1P53680 142 aaPredicted RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 DEFB1P60022 68 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 RAB11AP62491 216 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 QRFPP83859 136 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 ST3GAL4Q11206 333 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 INSL4Q14641 139 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 RAB11BQ15907 218 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 ESRGQ1W209 222 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 RRN3P1Q2M238 152 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 OGFRL1Q5TC84 451 aaPredicted RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 THOC7Q6I9Y2 204 aaKnown RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 Q6ZRN7 208 aaPredicted RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 INO80EQ8NBZ0 244 aaPredicted RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 OR4B1Q8NGF8 309 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 OR4C16Q8NGL9 310 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 OR1L8Q8NGR8 309 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 GPX8Q8TED1 209 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 LSM10Q969L4 123 aaKnown RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 GNPNAT1Q96EK6 184 aaPredicted RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 KCNS1Q96KK3 526 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 PGLYRP3Q96LB9 341 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 TMEM56Q96MV1 263 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 LINC00052Q96N35 136 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 SCGB3A2Q96PL1 93 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 TMEM70Q9BUB7 260 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 NAA50Q9GZZ1 169 aaKnown RBP1.59□□□□□ -2.15
XRN1-206ENST00000467077 SLC35B3Q9H1N7 401 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 DCSTAMPQ9H295 470 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 CLEC2DQ9UHP7 191 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 POMPQ9Y244 141 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 AP4S1Q9Y587 144 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 OR51B2Q9Y5P1 312 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 HLA-DRB4X5D2U9 266 aa1.59□□□□□ -2.15
XRN1-206ENST00000467077 FLG2Q5D862 2391 aaPredicted RBP1.59□□□□□ -2.16
XRN1-206ENST00000467077 A0A0J9YY99 117 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 IRGMA1A4Y4 181 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 DENRO43583 198 aaKnown RBP1.58□□□□□ -2.16
XRN1-206ENST00000467077 PSCAO43653 123 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 MPDU1O75352 247 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 HTN1P15515 57 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 M6PRP20645 277 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 GADD45AP24522 165 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 CRYBB3P26998 211 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 CLDN12P56749 244 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 PSG9Q00887 426 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 DNAL1Q4LDG9 190 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 ACSM3Q53FZ2 586 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 HSD17B12Q53GQ0 312 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 GDF5OSQ5U4N7 250 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 FAM78BQ5VT40 261 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 EBLN2Q6P2I7 272 aa1.58□□□□□ -2.16
XRN1-206ENST00000467077 C1orf158Q8N1D5 194 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms