RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 RAB42Q8N4Z0 105 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 OR8B3Q8NGG8 313 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 RFESDQ8TAC1 157 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 LRRC29Q8WV35 223 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 GEMIN6Q8WXD5 167 aaKnown RBP2.37□□□□□ -2.03
SNX4-202ENST00000465505 C11orf52Q96A22 123 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 CNRIP1Q96F85 164 aaPredicted RBP2.37□□□□□ -2.03
SNX4-202ENST00000465505 ZNF414Q96IQ9 312 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 FAM218AQ96MZ4 157 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 OR8B2Q96RD0 313 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 CHCHD5Q9BSY4 110 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 MANBALQ9NQG1 85 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 PRR34Q9NV39 138 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 HIGD1BQ9P298 99 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 KLK13Q9UKR3 277 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 SLC25A15Q9Y619 301 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 V9GY05 133 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 MUC4Q99102 2169 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 DSCAMO60469 2012 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 SCN3AQ9NY46 2000 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 SVILO95425 2214 aa2.37□□□□□ -2.03
SNX4-202ENST00000465505 DDX60Q8IY21 1712 aaKnown RBP2.37□□□□□ -2.03
SNX4-202ENST00000465505 PAPPAQ13219 1627 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 TRAV1-1A0A0B4J248 108 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 IGKV1-9A0A0C4DH69 117 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 MDFIC2A0A1B0GVS7 189 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 hADV29S1A0JD25 119 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 RBMY1BA6NDE4 496 aaKnown RBP2.36□□□□□ -2.03
SNX4-202ENST00000465505 RBMY1EA6NEQ0 496 aaKnown RBP2.36□□□□□ -2.03
SNX4-202ENST00000465505 E7EQL1 145 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 HLA-DQA1P01909 254 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 HBDP02042 147 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 RBMY1DP0C7P1 496 aaKnown RBP2.36□□□□□ -2.03
SNX4-202ENST00000465505 SMIM13P0DJ93 91 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 RBMY1A1P0DJD3 496 aaKnown RBP2.36□□□□□ -2.03
SNX4-202ENST00000465505 CXCL8P10145 99 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 PTHLHP12272 177 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 DAPP51397 102 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 KRTAP10-8P60410 259 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 CCL20P78556 96 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 CXCL6P80162 114 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 FUT5Q11128 374 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 RSPO1Q2MKA7 263 aaPredicted RBP2.36□□□□□ -2.03
SNX4-202ENST00000465505 ORMDL2Q53FV1 153 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 DEFB121Q5J5C9 76 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 C12orf73Q69YU5 71 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 EBLN2Q6P2I7 272 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 TOMM5Q8N4H5 51 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 SERP2Q8N6R1 65 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 C3orf56Q8N813 242 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 ZNF491Q8N8L2 437 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 CYB561D1Q8N8Q1 229 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 LINC01555Q8NAE3 123 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 TSKUQ8WUA8 353 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 SMIM4Q8WVI0 70 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 DIRC1Q969H9 104 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 VSIG2Q96IQ7 327 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 TIMM17AQ99595 171 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 TRGV9Q99603 122 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 MGST2Q99735 147 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 PCDH15Q96QU1 1955 aa2.36□□□□□ -2.03
SNX4-202ENST00000465505 MED1Q15648 1581 aaPredicted RBP2.36□□□□□ -2.03
SNX4-202ENST00000465505 TET2Q6N021 2002 aaPredicted RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 LAMA4Q16363 1823 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 NRXN3Q9Y4C0 1643 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 HEATR5BQ9P2D3 2071 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 DDX60LQ5H9U9 1706 aaKnown RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 TOGARAM1Q9Y4F4 1720 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 IGKV1-27A0A075B6S5 117 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 IGHV1-69DA0A0B4J2H0 117 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 IGKV1-8A0A0C4DH67 115 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 A0A1B0GW54 56 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 BUB1B-PAK6H3BSN5 160 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 CCL16O15467 120 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 BCE1O60756 84 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 SERF1AO75920 110 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 LTAP01374 205 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 APCSP02743 223 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 ACYP1P07311 99 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 ASAH2BP0C7U1 165 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 RNASE4P34096 147 aaKnown RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 CSN1S1P47710 185 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 DYNLT3P51808 116 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 ZNF138P52744 262 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 SYNJ2BPP57105 145 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 ERVK-16P61578 105 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 SNRPFP62306 86 aaKnown RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 UBE2BP63146 152 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 RPS21P63220 83 aaKnown RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 MIC13Q5XKP0 118 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 PRNTQ86SH4 94 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 LINC00596Q86U02 117 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 GPHB5Q86YW7 130 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.35□□□□□ -2.03
SNX4-202ENST00000465505 Q8N8P6 123 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 NKAPP1Q8N9T2 125 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 FAM213BQ8TBF2 198 aa2.35□□□□□ -2.03
SNX4-202ENST00000465505 C10orf105Q8TEF2 133 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms