RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF469Q96JG9 3925 aaPredicted RBP9.61□□□□□ -0.87
LINC00959-201ENST00000456581 APCP25054 2843 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 SPRY2O43597 315 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 NMUP48645 174 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 C12orf54Q6X4T0 127 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 MINOS1-NBL1R4GNA1 71 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
LINC00959-201ENST00000456581 IGKV2D-26A0A0A0MRZ7 120 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 K7EQM0 130 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 GOSR1O95249 250 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 CSN1S1P47710 185 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 ECSCRQ19T08 205 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 FAM104BQ5XKR9 115 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 LINC00527Q9UJ94 153 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 G3V318 75 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 SMAD5-AS1Q9Y6J3 95 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 TRAV40A0A0B4J280 105 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 WI2-2373I1.2A0A1W2PRP0 233 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 NPFFO15130 113 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 CD5LO43866 347 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 IGHG4P01861 327 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 EBI3Q14213 229 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
LINC00959-201ENST00000456581 CKS2P33552 79 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 ZNF843Q8N446 348 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 K7ERJ3 54 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 ORM1P02763 201 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 IGHV4-38-2P0DP08 117 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 MFAP4P55083 255 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 C10orf105Q8TEF2 133 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 PRR25Q96S07 402 aa9.59□□□□□ -0.87
LINC00959-201ENST00000456581 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 SRSF1Q07955 248 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC00959-201ENST00000456581 SMIM15Q7Z3B0 74 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 MAPK1IP1LQ8NDC0 245 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 KIR3DS1Q14943 382 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 C21orf62Q9NYP8 219 aa9.58□□□□□ -0.88
LINC00959-201ENST00000456581 HELZ2Q9BYK8 2649 aaKnown RBP9.57□□□□□ -0.88
LINC00959-201ENST00000456581 PIMREGQ9BSJ6 248 aa9.57□□□□□ -0.88
LINC00959-201ENST00000456581 SORL1Q92673 2214 aa9.57□□□□□ -0.88
LINC00959-201ENST00000456581 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
LINC00959-201ENST00000456581 RPS20P60866 119 aaKnown RBP9.57□□□□□ -0.88
LINC00959-201ENST00000456581 ZNF493Q6ZR52 646 aa9.57□□□□□ -0.88
LINC00959-201ENST00000456581 TRAV26-2A0A0B4J265 109 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 PAX8Q06710 450 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 SETD2Q9BYW2 2564 aaPredicted RBP9.56□□□□□ -0.88
LINC00959-201ENST00000456581 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
LINC00959-201ENST00000456581 CTSGP08311 255 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 CLEC2AQ6UVW9 174 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 IFI27L1Q96BM0 104 aa9.56□□□□□ -0.88
LINC00959-201ENST00000456581 TRBV6-1A0A0K0K1D8 114 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 AVPP01185 164 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 HBDP02042 147 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 LY6EQ16553 131 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 IL17RELQ6ZVW7 336 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 MTURNQ8N3F0 131 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 ACANP16112 2415 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 ADAMTSL5Q6ZMM2 481 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 GATD1Q8NB37 220 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 PIFOQ8TCI5 191 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 U3KQK5 164 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 J3KRW8 73 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 TRGV3P03979 118 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 FXYD2P54710 66 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 LYPD1Q8N2G4 141 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
LINC00959-201ENST00000456581 NF1P21359 2839 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 PRRC2AP48634 2157 aaKnown RBP9.54□□□□□ -0.88
LINC00959-201ENST00000456581 LEPP41159 167 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 PEF1Q9UBV8 284 aaKnown RBP9.54□□□□□ -0.88
LINC00959-201ENST00000456581 ITPR2Q14571 2701 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 IGHV1-69DA0A0B4J2H0 117 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 SMAD7O15105 426 aaKnown RBP9.54□□□□□ -0.88
LINC00959-201ENST00000456581 IGHV1-69P01742 117 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 C11orf21Q9P2W6 132 aa9.54□□□□□ -0.88
LINC00959-201ENST00000456581 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 DEFB1P60022 68 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 KRTAP10-9P60411 292 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 ITPR3Q14573 2671 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 Q6AWC8 147 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 LCNL1Q6ZST4 164 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
LINC00959-201ENST00000456581 CLEC3BP05452 202 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 328.7 ms