RNA–Protein interactions for RNA: ENST00000449858.2

GAPDHP17-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 17, humanhuman

BASIC

Gene GAPDHP17, Length 1,001 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP17-201ENST00000449858 UBE2BP63146 152 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 SARNPP82979 210 aaKnown RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 C1orf140Q5VVS0 124 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PHF5AQ7RTV0 110 aaKnown RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 TEN1Q86WV5 123 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 TMEM229BQ8NBD8 167 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PYDC1Q8WXC3 89 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 MALSU1Q96EH3 234 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 NABP2Q9BQ15 211 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 LIMD2Q9BT23 127 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PBDC1Q9BVG4 233 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 GGACTQ9BVM4 153 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 NPCDR1Q9BY65 106 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 SMIM3Q9BZL3 60 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 OR2H1Q9GZK4 316 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 LPAR5Q9H1C0 372 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 TMEM138Q9NPI0 162 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 NAT8BQ9UHF3 227 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 SSR3Q9UNL2 185 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 HIGD1AQ9Y241 93 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 IBTKQ9P2D0 1353 aaPredicted RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 SOGA1O94964 1423 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PTPRGP23470 1445 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PRG4Q92954 1404 aaPredicted RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 YTHDC2Q9H6S0 1430 aaKnown RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PTPRMP28827 1452 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 CAMSAP2Q08AD1 1489 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 NISCHQ9Y2I1 1504 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 SCN7AQ01118 1682 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PRDM2Q13029 1718 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 ARAP2Q8WZ64 1704 aa0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 SIPA1L3O60292 1781 aaPredicted RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PDCD11Q14690 1871 aaKnown RBP0.26□□□□□ -2.37
GAPDHP17-201ENST00000449858 PLXNB2O15031 1838 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 ZNF142P52746 1687 aaPredicted RBP0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 ERCC6Q03468 1493 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 OVOS2A0A0J9YW53 1432 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 OVOS2Q6IE36 1432 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 TRAPPC8Q9Y2L5 1435 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 RTL9Q8NET4 1388 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 CCDC171Q6TFL3 1326 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 DSPPQ9NZW4 1301 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 TRAV27A0A087WT01 109 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 TRBV7-6A0A0J9YX20 115 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 A0A1B0GX51 115 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 E7EQ34 232 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 F8W1H4 67 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 CCDC179H3BU77 68 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 CDC42EP2O14613 210 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 RER1O15258 196 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 GNG7O60262 68 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 ERC2-IT1O76042 136 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 PRH1P02810 166 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 OR10J4P0C629 311 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 BCL2P10415 239 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SCGB1A1P11684 91 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 FABP2P12104 132 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 HLA-EP13747 358 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 OGNP20774 298 aaKnown RBP0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 MAXP61244 160 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 RRAS2P62070 204 aaPredicted RBP0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SNRPD3P62318 126 aaKnown RBP0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 HBBP68871 147 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 S100A12P80511 92 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SMCO1Q147U7 214 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 RTL8BQ17RB0 113 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 VMA21Q3ZAQ7 101 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SPINK9Q5DT21 86 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SCIMPQ6UWF3 145 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 TOMM20LQ6UXN7 152 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 LINC00305Q7Z4B0 112 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 LINC00269Q8N2A0 174 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 NUP35Q8NFH5 326 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 TSTD1Q8NFU3 115 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 OR9Q1Q8NGQ5 310 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 OR4K15Q8NH41 348 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 CCL4L1Q8NHW4 92 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 PPTC7Q8NI37 304 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 DIRC1Q969H9 104 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 MUCL1Q96DR8 90 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SDF2Q99470 211 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 PFDN5Q99471 154 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 CCDC32Q9BV29 185 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 RTL8AQ9BWD3 113 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 PBOV1Q9GZY1 135 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 BANF2Q9H503 90 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 HSPB8Q9UJY1 196 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 LAMTOR2Q9Y2Q5 125 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 LSM2Q9Y333 95 aaKnown RBP0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 DNAJC15Q9Y5T4 150 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 NUBP2Q9Y5Y2 271 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 KMT2DO14686 5537 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 TTC28Q96AY4 2481 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 DOCK11Q5JSL3 2073 aa0.25□□□□□ -2.37
GAPDHP17-201ENST00000449858 SBF2Q86WG5 1849 aa0.24□□□□□ -2.37
GAPDHP17-201ENST00000449858 RGPD3A6NKT7 1758 aaPredicted RBP0.24□□□□□ -2.37
GAPDHP17-201ENST00000449858 SPHKAPQ2M3C7 1700 aa0.24□□□□□ -2.37
GAPDHP17-201ENST00000449858 MON2Q7Z3U7 1717 aa0.24□□□□□ -2.37
GAPDHP17-201ENST00000449858 NWD2Q9ULI1 1742 aa0.24□□□□□ -2.37
GAPDHP17-201ENST00000449858 COL4A6Q14031 1691 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms