RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 NHLRC2Q8NBF2 726 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 C2CD4CQ8TF44 421 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 TREM1Q9NP99 234 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 IFNA1P01562 189 aa9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 NEU1Q99519 415 aa9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 NIPSNAP3BQ9BS92 247 aa9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 TP53TG3Q9ULZ0 132 aa9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 STARD9Q9P2P6 4700 aa9.53□□□□□ -0.88
HLA-DOB-207ENST00000447394 H7BYZ3 331 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 NMBP08949 121 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 UBE2G1P62253 170 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 IFITM2Q01629 132 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 RRN3P1Q2M238 152 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 ZNF767PQ75MW2 155 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 NDFIP1Q9BT67 221 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 NAGKQ9UJ70 344 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
HLA-DOB-207ENST00000447394 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 TAS2R60P59551 318 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 TMEM183BQ1AE95 376 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 Q6AWC8 147 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 TMEM256Q8N2U0 113 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 IL17DQ8TAD2 202 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 C11orf52Q96A22 123 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 ZC2HC1AQ96GY0 325 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 FMC1Q96HJ9 113 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 WWC2-AS2Q96NR7 200 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 C20orf144Q9BQM9 153 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 TCEAL7Q9BRU2 100 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
HLA-DOB-207ENST00000447394 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 GCGP01275 180 aa9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 LTAP01374 205 aa9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 RPL35P42766 123 aaKnown RBP9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 PMS2P11Q13670 270 aa9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
HLA-DOB-207ENST00000447394 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 RAB19A4D1S5 217 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 CBY3A6NI87 242 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 RGS13O14921 159 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 SMUG1Q53HV7 270 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 ZFAND6Q6FIF0 208 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 PYGO2Q9BRQ0 406 aa9.49□□□□□ -0.89
HLA-DOB-207ENST00000447394 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 TRBV6-1A0A0K0K1D8 114 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 PGPEP1LA6NFU8 196 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 CRIP1P50238 77 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 SRSF3P84103 164 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 ANXA2RQ3ZCQ2 193 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 CENPWQ5EE01 88 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 SAPCD1Q5SSQ6 148 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 EIF4E3Q8N5X7 224 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 TMEM263Q8WUH6 116 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 C16orf74Q96GX8 76 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 EIF5A2Q9GZV4 153 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 GSN-AS1Q9NRJ2 163 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 MED9Q9NWA0 146 aa9.48□□□□□ -0.89
HLA-DOB-207ENST00000447394 TRBV20OR9-2A0A075B6H5 130 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 TRAV21A0A0B4J279 112 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 PDE6DO43924 150 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 ATP6V1G1O75348 118 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 CEBPGP53567 150 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 TMEM183AQ8IXX5 376 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 MUC7Q8TAX7 377 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 TXNDC17Q9BRA2 123 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 DKK2Q9UBU2 259 aa9.47□□□□□ -0.89
HLA-DOB-207ENST00000447394 CXorf65A6NEN9 183 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 GNRH2O43555 120 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 SH2D1AO60880 128 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 ZNF674Q2M3X9 581 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 C12orf74Q32Q52 190 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 Q6ZTC4 211 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 BAGE2Q86Y30 109 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 MDFICQ9P1T7 246 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 ZFP30Q9Y2G7 519 aa9.46□□□□□ -0.9
HLA-DOB-207ENST00000447394 TMEM189A5PLL7 270 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 C9JQL5 133 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 IGLV2-8P01709 118 aa9.45□□□□□ -0.9
HLA-DOB-207ENST00000447394 TYMSP04818 313 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms