RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
SLC48A1-201ENST00000442218 FBN2P35556 2912 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 A1L4Q6 167 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 ATP6V0E1O15342 81 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 CD5LO43866 347 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 RPL7P18124 248 aaKnown RBP10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 ZNF562Q6V9R5 426 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 GLMPQ8WWB7 406 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 TIMD4Q96H15 378 aa10.15□□□□□ -0.79
SLC48A1-201ENST00000442218 ZNF462Q96JM2 2506 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 EFNA4P52798 201 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 MEGF9Q9H1U4 602 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 MS4A6AQ9H2W1 248 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 FCER1GP30273 86 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 CEACAM3P40198 252 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 TMEM158Q8WZ71 300 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
SLC48A1-201ENST00000442218 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
SLC48A1-201ENST00000442218 TNFRSF6BO95407 300 aa10.13□□□□□ -0.79
SLC48A1-201ENST00000442218 PEF1Q9UBV8 284 aaKnown RBP10.13□□□□□ -0.79
SLC48A1-201ENST00000442218 NF1P21359 2839 aa10.13□□□□□ -0.79
SLC48A1-201ENST00000442218 C19orf84I3L1E1 186 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 SMAD7O15105 426 aaKnown RBP10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 SRD5A1P18405 259 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 NIPBLQ6KC79 2804 aaeCLIP10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 IGKV3D-20A0A0C4DH25 116 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 NDUFA3O95167 84 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 FXYD2P54710 66 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 RPL11P62913 178 aaKnown RBP10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 DTX2Q86UW9 622 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 ITLN2Q8WWU7 325 aaPredicted RBP10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 PRTN3P24158 256 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 CDKN1BP46527 198 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 ZNF493Q6ZR52 646 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 LYPD1Q8N2G4 141 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 OR11H6Q8NGC7 330 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 AGPAT4-IT1Q9H0P7 198 aa10.12□□□□□ -0.79
SLC48A1-201ENST00000442218 CCDC168Q8NDH2 2452 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 A0A0G2JLM5 398 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 TMEM8BA6NDV4 472 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 H3BVH4 76 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 MAP1LC3AQ9H492 121 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 C2CD3Q4AC94 2353 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 M0R381 172 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 IGHV3-11P01762 117 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 SAPCD1Q5SSQ6 148 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 Q8N9W7 124 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 NPBQ8NG41 125 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 OR2K2Q8NGT1 345 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 HIF1ANQ9NWT6 349 aa10.11□□□□□ -0.79
SLC48A1-201ENST00000442218 FABP5P3A8MUU1 101 aa10.1□□□□□ -0.79
SLC48A1-201ENST00000442218 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
SLC48A1-201ENST00000442218 F6UB75 175 aa10.1□□□□□ -0.79
SLC48A1-201ENST00000442218 GOSR1O95249 250 aa10.1□□□□□ -0.79
SLC48A1-201ENST00000442218 SAA4P35542 130 aa10.1□□□□□ -0.79
SLC48A1-201ENST00000442218 TRBV12-3P01733 135 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 Q6AWC8 147 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 BOD1L2Q8IYS8 172 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 BPESC1Q9GZL8 116 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 NHP2Q9NX24 153 aaKnown RBP10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 ODF3BA8MYP8 253 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 BMI1P35226 326 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 PDE6HQ13956 83 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 LY6EQ16553 131 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 LGALS9BQ3B8N2 356 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 TTC9CQ8N5M4 171 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 PRR9Q5T870 116 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 CCDC140Q96MF4 163 aa10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
SLC48A1-201ENST00000442218 BUB3O43684 328 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 EMP1P54849 157 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 RNF5Q99942 180 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 SPCS1Q9Y6A9 102 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 TEX15Q9BXT5 2789 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 PAX2Q02962 417 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 PAX8Q06710 450 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 U3KQK5 164 aa10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
SLC48A1-201ENST00000442218 ODF1Q14990 250 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 A0A1B0GW15 77 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 A6NDN8 102 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 PRB1P04280 392 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 C11orf71Q6IPW1 123 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
SLC48A1-201ENST00000442218 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms