RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 TYMSP04818 313 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 MEOX2P50222 304 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 SLAQ13239 276 aa11.4□□□□□ -0.58
CPSF7-205ENST00000439958 SNRPD3P62318 126 aaKnown RBP11.39□□□□□ -0.59
CPSF7-205ENST00000439958 WDR73Q6P4I2 378 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 FABP5P3A8MUU1 101 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 CDX1P47902 265 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-205ENST00000439958 HBBP68871 147 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 ZNF492Q9P255 531 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 TMEM89A2RUT3 159 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 FXYD7P58549 80 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
CPSF7-205ENST00000439958 BRI3O95415 125 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 F2Z2F3 143 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 CSN3P07498 182 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
CPSF7-205ENST00000439958 TWIST1Q15672 202 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 GDF5OSQ5U4N7 250 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 TMEM136Q6ZRR5 245 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 IQCJQ1A5X6 159 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
CPSF7-205ENST00000439958 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 HILS1P60008 231 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 TRAV12-2A0A075B6T6 113 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 K7EMT4 169 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 NTF3P20783 257 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 OR9G4Q8NGQ1 327 aa11.37□□□□□ -0.59
CPSF7-205ENST00000439958 CCL24O00175 119 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
CPSF7-205ENST00000439958 C4orf3Q8WVX3 66 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 PEMTQ9UBM1 199 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 M0R2Z0 102 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 PMCHP20382 165 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 ZNF124Q15973 351 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 Q8N2B8 174 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 C12orf57Q99622 126 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 ZNF580Q9UK33 172 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 MAST4O15021 2626 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 UBE2CO00762 179 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 HOXA5P20719 270 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 EBLN2Q6P2I7 272 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 FER1L6-AS1Q8NA97 138 aa11.36□□□□□ -0.59
CPSF7-205ENST00000439958 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 RAX2Q96IS3 184 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 OVOL1O14753 267 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 DEFB131AP59861 70 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 MT-ND6P03923 174 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 PRR9Q5T870 116 aa11.35□□□□□ -0.59
CPSF7-205ENST00000439958 TRAV12-3A0A0B4J271 114 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 TCF21O43680 179 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 RIGQ13278 110 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 KLF5Q13887 457 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-205ENST00000439958 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-205ENST00000439958 JMJD8Q96S16 334 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 SERF1AO75920 110 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
CPSF7-205ENST00000439958 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 H3BVH4 76 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 SAP30O75446 220 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 SPINK13Q1W4C9 94 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 DCANP1Q8TF63 244 aa11.34□□□□□ -0.59
CPSF7-205ENST00000439958 MSRB1Q9NZV6 116 aa11.33□□□□□ -0.6
CPSF7-205ENST00000439958 TENM1Q9UKZ4 2725 aa11.33□□□□□ -0.6
CPSF7-205ENST00000439958 M0R381 172 aa11.33□□□□□ -0.6
CPSF7-205ENST00000439958 PHOX2AO14813 284 aa11.33□□□□□ -0.6
CPSF7-205ENST00000439958 NUPR1O60356 82 aa11.33□□□□□ -0.6
CPSF7-205ENST00000439958 CT83Q5H943 113 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 APRG1Q8IVJ8 170 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 MYOZ3Q8TDC0 251 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 SOCS3O14543 225 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 CD300EQ496F6 205 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-205ENST00000439958 SPANXN1Q5VSR9 72 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 TSSC4Q9Y5U2 329 aaPredicted RBP11.32□□□□□ -0.6
CPSF7-205ENST00000439958 FBLL1A6NHQ2 334 aaKnown RBP11.32□□□□□ -0.6
CPSF7-205ENST00000439958 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 C9orf47Q6ZRZ4 202 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 FAM19A2Q8N3H0 131 aa11.32□□□□□ -0.6
CPSF7-205ENST00000439958 LOC389332A0A1B0GUA5 103 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 PF4P02776 101 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 ANK3Q12955 4377 aaKnown RBP11.31□□□□□ -0.6
CPSF7-205ENST00000439958 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 REC114Q7Z4M0 266 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
CPSF7-205ENST00000439958 A8MWP6 167 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms