RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 CD300EQ496F6 205 aaPredicted RBP5.86□□□□□ -1.47
LINC01108-201ENST00000427276 TMEM155Q4W5P6 130 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF562Q6V9R5 426 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 CEND1Q8N111 149 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF502Q8TBZ5 544 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 ANKHD1Q8IWZ3 2542 aaKnown RBP5.86□□□□□ -1.47
LINC01108-201ENST00000427276 IGLL5B9A064 214 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 BUB1B-PAK6H3BSN5 160 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 SIVA1O15304 175 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 EMP1P54849 157 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 MFAP4P55083 255 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 CFHR4Q92496 578 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 SPAG8Q99932 426 aaPredicted RBP5.86□□□□□ -1.47
LINC01108-201ENST00000427276 LINC00574Q9H8X3 128 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 MRPL16Q9NX20 251 aaKnown RBP5.86□□□□□ -1.47
LINC01108-201ENST00000427276 TLN1Q9Y490 2541 aaKnown RBP5.86□□□□□ -1.47
LINC01108-201ENST00000427276 K7EM74 188 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 TRGV3P03979 118 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 PSMB2P49721 201 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 C12orf74Q32Q52 190 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 VKORC1Q9BQB6 163 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 WI2-2373I1.2A0A1W2PRP0 233 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 FABP5P3A8MUU1 101 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 RPL7P18124 248 aaKnown RBP5.85□□□□□ -1.47
LINC01108-201ENST00000427276 DTX2Q86UW9 622 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 RNASE6Q93091 150 aaKnown RBP5.85□□□□□ -1.47
LINC01108-201ENST00000427276 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 C1orf43Q9BWL3 253 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 C21orf62Q9NYP8 219 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 CACNA1AO00555 2505 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 OR11H12B2RN74 326 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 PRAC2D3DTV9 90 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 M0R381 172 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 ECSCRQ19T08 205 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 PVRIGQ6DKI7 326 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF493Q6ZR52 646 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 IL17RELQ6ZVW7 336 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 OR11H1Q8NG94 326 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 OR11H2Q8NH07 326 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC01108-201ENST00000427276 NOTCH3Q9UM47 2321 aa5.85□□□□□ -1.47
LINC01108-201ENST00000427276 H7C2G1 150 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 PRRG2O14669 202 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 MGPP08493 103 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF883P0CG24 379 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 FOXI2Q6ZQN5 318 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 NXT2Q9NPJ8 142 aaKnown RBP5.84□□□□□ -1.47
LINC01108-201ENST00000427276 ASH1LQ9NR48 2969 aaKnown RBP5.84□□□□□ -1.47
LINC01108-201ENST00000427276 OTOGLQ3ZCN5 2332 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 SCGB1C2P0DMR2 95 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 S100A4P26447 101 aaKnown RBP5.84□□□□□ -1.47
LINC01108-201ENST00000427276 CCDC144NLQ6NUI1 221 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 Q6ZQT7 251 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 DYNAPQ8N1N2 210 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 LINC00311Q8N616 119 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 PTH2Q96A98 100 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
LINC01108-201ENST00000427276 COL27A1Q8IZC6 1860 aaPredicted RBP5.84□□□□□ -1.48
LINC01108-201ENST00000427276 OVOL3O00110 214 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 NBR2O15453 112 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 LYPD1Q8N2G4 141 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
LINC01108-201ENST00000427276 SORL1Q92673 2214 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 TRAV26-1A0A087WT03 109 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 ATP5LO75964 103 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 RPL11P62913 178 aaKnown RBP5.83□□□□□ -1.48
LINC01108-201ENST00000427276 SCGB3A1Q96QR1 104 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 ZNF292O60281 2723 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 MAP1AP78559 2803 aaPredicted RBP5.83□□□□□ -1.48
LINC01108-201ENST00000427276 F8W1H4 67 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 C3orf36Q3SXR2 165 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 RNF185Q96GF1 192 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 RAXQ9Y2V3 346 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 RELNP78509 3460 aa5.83□□□□□ -1.48
LINC01108-201ENST00000427276 A0A0G2JNJ9 132 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 LINC01549A6NIU2 74 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 HOXA3O43365 443 aaPredicted RBP5.82□□□□□ -1.48
LINC01108-201ENST00000427276 HLA-DRB4P13762 266 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 LAGE3Q14657 143 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 SRSF8Q9BRL6 282 aaKnown RBP5.82□□□□□ -1.48
LINC01108-201ENST00000427276 Q9UFV3 132 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 HLA-DRB4X5D2U9 266 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 TRAV25A0A0B4J276 109 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 NDPQ00604 133 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 TMEM78Q5T7P6 136 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 LINC01560Q8TB33 94 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 RAB1BQ9H0U4 201 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 TNFRSF18Q9Y5U5 241 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 U3KQK5 164 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 CEP295Q9C0D2 2601 aa5.82□□□□□ -1.48
LINC01108-201ENST00000427276 ZNF815PA8K554 130 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 E7EQL1 145 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 F8WDY8 70 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 IGLV1-47P01700 117 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 CRYGBP07316 175 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 SPINK8P0C7L1 97 aa5.81□□□□□ -1.48
LINC01108-201ENST00000427276 HOXB4P17483 251 aaPredicted RBP5.81□□□□□ -1.48
LINC01108-201ENST00000427276 DLX6P56179 175 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms