RNA–Protein interactions for RNA: ENST00000418533.6

LTBP1-207, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene LTBP1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-207ENST00000418533 IGHV1-3A0A0C4DH29 117 aa6.82□□□□□ -1.32
LTBP1-207ENST00000418533 PAX4O43316 350 aa6.82□□□□□ -1.32
LTBP1-207ENST00000418533 ZNF474Q6S9Z5 364 aaPredicted RBP6.82□□□□□ -1.32
LTBP1-207ENST00000418533 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
LTBP1-207ENST00000418533 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
LTBP1-207ENST00000418533 SMAD5-AS1Q9Y6J3 95 aa6.82□□□□□ -1.32
LTBP1-207ENST00000418533 MDC1Q14676 2089 aaKnown RBP6.82□□□□□ -1.32
LTBP1-207ENST00000418533 COL4A4P53420 1690 aaPredicted RBP6.82□□□□□ -1.32
LTBP1-207ENST00000418533 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 ATOX1O00244 68 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 IGHV1-8P0DP01 117 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 FAM120AOSQ5T036 256 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 PRR25Q96S07 402 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 DOCK8Q8NF50 2099 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 DOCK9Q9BZ29 2069 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 J3QQQ9 107 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 MORN5Q5VZ52 161 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 C11orf44Q8N8P7 122 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 RNF183Q96D59 192 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 LAMTOR3Q9UHA4 124 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 FOXG1P55316 489 aaPredicted RBP6.81□□□□□ -1.32
LTBP1-207ENST00000418533 USMG5Q96IX5 58 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 H3BUX3 64 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 ANXA2RQ3ZCQ2 193 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 IL17RELQ6ZVW7 336 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 PRIMA1Q86XR5 153 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 CACNA1HO95180 2353 aa6.81□□□□□ -1.32
LTBP1-207ENST00000418533 SVILO95425 2214 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 A0A1W2PPI3 338 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 IGKV1-16P04430 117 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 SPATA12Q7Z6I5 190 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 C8orf49Q96NF6 230 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 ATP5G1P05496 136 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 LOXL1Q08397 574 aaPredicted RBP6.8□□□□□ -1.32
LTBP1-207ENST00000418533 TRBV7-1A0A0A6YYK4 115 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 TMEM178BH3BS89 294 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 RBMY1FQ15415 496 aaKnown RBP6.8□□□□□ -1.32
LTBP1-207ENST00000418533 NDUFC2O95298 119 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 FXYD2P54710 66 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 C15orf32Q32M92 178 aa6.8□□□□□ -1.32
LTBP1-207ENST00000418533 PRR30Q53SZ7 412 aaPredicted RBP6.8□□□□□ -1.32
LTBP1-207ENST00000418533 CGB3P0DN86 165 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 GAFA1Q96PS6 74 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 PROK2Q9HC23 129 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 RTTNQ86VV8 2226 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 NOTCH4Q99466 2003 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 SRRM4A7MD48 611 aaKnown RBP6.79□□□□□ -1.32
LTBP1-207ENST00000418533 IGFL2Q6UWQ7 119 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 LINC00173Q6ZV60 143 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 IGF2BP2-AS1Q96M15 143 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 JPT2Q9H910 190 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 C2orf70A6NJV1 201 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 H3BRN7 92 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 MALP21145 153 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 C5orf64Q2M2E5 130 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
LTBP1-207ENST00000418533 GVINP1Q7Z2Y8 2422 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 HERV-K104P63124 156 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 Q6ZSR3 168 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 C11orf1Q9H5F2 150 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 IGHV1-69DA0A0B4J2H0 117 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 LINC01619G3V211 115 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 IGHV1-69P01742 117 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 CTRLP40313 264 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 RSPO1Q2MKA7 263 aaPredicted RBP6.78□□□□□ -1.32
LTBP1-207ENST00000418533 ELANEP08246 267 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 CGB7P0DN87 165 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 ZNF493Q6ZR52 646 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 KIAA2026Q5HYC2 2103 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 TRAV41A0A0B4J266 112 aa6.78□□□□□ -1.32
LTBP1-207ENST00000418533 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
LTBP1-207ENST00000418533 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
LTBP1-207ENST00000418533 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
LTBP1-207ENST00000418533 C2orf16Q68DN1 1984 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 TRAV13-2A0A0B4J235 113 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 I3L3M4 83 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 MYCNOSP40205 109 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 ZNF833PQ6ZTB9 187 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 Q6ZUT4 128 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 PHF3Q92576 2039 aaKnown RBP6.77□□□□□ -1.33
LTBP1-207ENST00000418533 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 BUB1B-PAK6H3BSN5 160 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 ERCC8Q13216 396 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 C5orf47Q569G3 176 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 PIP4P2Q8N4L2 257 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 ZNF625Q96I27 306 aaPredicted RBP6.77□□□□□ -1.33
LTBP1-207ENST00000418533 LINC01620Q4KN68 170 aa6.77□□□□□ -1.33
LTBP1-207ENST00000418533 CACNA1EQ15878 2313 aa6.76□□□□□ -1.33
LTBP1-207ENST00000418533 TRAV12-1A0A0B4J245 112 aa6.76□□□□□ -1.33
LTBP1-207ENST00000418533 FAM236AA0A1B0GUQ0 79 aa6.76□□□□□ -1.33
LTBP1-207ENST00000418533 FAM236BA0A1B0GV22 79 aa6.76□□□□□ -1.33
LTBP1-207ENST00000418533 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
LTBP1-207ENST00000418533 Q8TCH9 128 aa6.76□□□□□ -1.33
LTBP1-207ENST00000418533 SDK2Q58EX2 2172 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms