RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 C16orf95Q9H693 158 aa8.84□□□□□ -0.99
SKA3-203ENST00000400018 DAZ1Q9NQZ3 744 aaKnown RBP8.84□□□□□ -0.99
SKA3-203ENST00000400018 CBLN1P23435 193 aa8.83□□□□□ -1
SKA3-203ENST00000400018 FAM106AQ4KMX7 169 aa8.83□□□□□ -1
SKA3-203ENST00000400018 SIGLEC15Q6ZMC9 328 aa8.83□□□□□ -1
SKA3-203ENST00000400018 TCF24Q7RTU0 167 aa8.83□□□□□ -1
SKA3-203ENST00000400018 RNF152Q8N8N0 203 aa8.83□□□□□ -1
SKA3-203ENST00000400018 C4orf3Q8WVX3 66 aa8.83□□□□□ -1
SKA3-203ENST00000400018 JMJD8Q96S16 334 aa8.83□□□□□ -1
SKA3-203ENST00000400018 SMIM7Q9BQ49 75 aa8.83□□□□□ -1
SKA3-203ENST00000400018 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
SKA3-203ENST00000400018 C2orf70A6NJV1 201 aa8.83□□□□□ -1
SKA3-203ENST00000400018 KIR3DS1Q14943 382 aa8.83□□□□□ -1
SKA3-203ENST00000400018 OR4F17Q8NGA8 305 aa8.83□□□□□ -1
SKA3-203ENST00000400018 SMIM12Q96EX1 92 aa8.83□□□□□ -1
SKA3-203ENST00000400018 BTF3L4Q96K17 158 aa8.83□□□□□ -1
SKA3-203ENST00000400018 IMMP2LQ96T52 175 aa8.83□□□□□ -1
SKA3-203ENST00000400018 UQCR10Q9UDW1 63 aa8.83□□□□□ -1
SKA3-203ENST00000400018 ZNF580Q9UK33 172 aa8.83□□□□□ -1
SKA3-203ENST00000400018 TRAPPC1Q9Y5R8 145 aa8.83□□□□□ -1
SKA3-203ENST00000400018 MGAM2Q2M2H8 2515 aa8.83□□□□□ -1
SKA3-203ENST00000400018 ZNF688P0C7X2 276 aa8.82□□□□□ -1
SKA3-203ENST00000400018 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
SKA3-203ENST00000400018 GDF5OSQ5U4N7 250 aa8.82□□□□□ -1
SKA3-203ENST00000400018 PRR27Q6MZM9 219 aa8.82□□□□□ -1
SKA3-203ENST00000400018 NBEAL1Q6ZS30 2694 aa8.82□□□□□ -1
SKA3-203ENST00000400018 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
SKA3-203ENST00000400018 IGLC3P0DOY3 106 aa8.82□□□□□ -1
SKA3-203ENST00000400018 HIST1H1EP10412 219 aaKnown RBP8.82□□□□□ -1
SKA3-203ENST00000400018 VGLL1Q99990 258 aa8.82□□□□□ -1
SKA3-203ENST00000400018 WFDC10AQ9H1F0 79 aa8.82□□□□□ -1
SKA3-203ENST00000400018 SMPXQ9UHP9 88 aa8.82□□□□□ -1
SKA3-203ENST00000400018 TSSC4Q9Y5U2 329 aaPredicted RBP8.82□□□□□ -1
SKA3-203ENST00000400018 DNHD1Q96M86 4753 aa8.82□□□□□ -1
SKA3-203ENST00000400018 CTRLP40313 264 aa8.82□□□□□ -1
SKA3-203ENST00000400018 C19orf24Q9BVV8 132 aa8.82□□□□□ -1
SKA3-203ENST00000400018 SAP30O75446 220 aa8.81□□□□□ -1
SKA3-203ENST00000400018 KRTDAPP60985 99 aa8.81□□□□□ -1
SKA3-203ENST00000400018 RPL23P62829 140 aaKnown RBP8.81□□□□□ -1
SKA3-203ENST00000400018 OR4B1Q8NGF8 309 aa8.81□□□□□ -1
SKA3-203ENST00000400018 TMEM167BQ9NRX6 74 aa8.81□□□□□ -1
SKA3-203ENST00000400018 NAT8Q9UHE5 227 aa8.81□□□□□ -1
SKA3-203ENST00000400018 K7ERU9 68 aa8.81□□□□□ -1
SKA3-203ENST00000400018 CA1P00915 261 aaPredicted RBP8.81□□□□□ -1
SKA3-203ENST00000400018 IFNA1P01562 189 aa8.81□□□□□ -1
SKA3-203ENST00000400018 LINC00310P59036 64 aa8.81□□□□□ -1
SKA3-203ENST00000400018 TMEM61Q8N0U2 210 aa8.81□□□□□ -1
SKA3-203ENST00000400018 CLEC5AQ9NY25 188 aa8.81□□□□□ -1
SKA3-203ENST00000400018 TP53TG3Q9ULZ0 132 aa8.81□□□□□ -1
SKA3-203ENST00000400018 U3KQE9 123 aa8.81□□□□□ -1
SKA3-203ENST00000400018 K7EN84 100 aa8.8□□□□□ -1
SKA3-203ENST00000400018 NDUFA7O95182 113 aa8.8□□□□□ -1
SKA3-203ENST00000400018 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
SKA3-203ENST00000400018 PRNTQ86SH4 94 aa8.8□□□□□ -1
SKA3-203ENST00000400018 OR9G4Q8NGQ1 327 aa8.8□□□□□ -1
SKA3-203ENST00000400018 C16orf92Q96LL3 132 aa8.8□□□□□ -1
SKA3-203ENST00000400018 C8orf49Q96NF6 230 aa8.8□□□□□ -1
SKA3-203ENST00000400018 SERF1AO75920 110 aa8.8□□□□□ -1
SKA3-203ENST00000400018 MGST1P10620 155 aaKnown RBP8.8□□□□□ -1
SKA3-203ENST00000400018 RPL7P18124 248 aaKnown RBP8.8□□□□□ -1
SKA3-203ENST00000400018 MYCNOSP40205 109 aa8.8□□□□□ -1
SKA3-203ENST00000400018 LINC00322Q6ZN03 302 aaPredicted RBP8.8□□□□□ -1
SKA3-203ENST00000400018 OCC1Q8TAD7 63 aa8.8□□□□□ -1
SKA3-203ENST00000400018 DIRC3C9JPN6 131 aa8.79□□□□□ -1
SKA3-203ENST00000400018 SPRY2O43597 315 aa8.79□□□□□ -1
SKA3-203ENST00000400018 SCGB2A1O75556 95 aa8.79□□□□□ -1
SKA3-203ENST00000400018 BRI3O95415 125 aa8.79□□□□□ -1
SKA3-203ENST00000400018 CENPWQ5EE01 88 aa8.79□□□□□ -1
SKA3-203ENST00000400018 APRG1Q8IVJ8 170 aa8.79□□□□□ -1
SKA3-203ENST00000400018 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
SKA3-203ENST00000400018 RNASE7Q9H1E1 156 aaKnown RBP8.79□□□□□ -1
SKA3-203ENST00000400018 MS4A6AQ9H2W1 248 aa8.79□□□□□ -1
SKA3-203ENST00000400018 ZNF331Q9NQX6 463 aaPredicted RBP8.79□□□□□ -1
SKA3-203ENST00000400018 EPDR1Q9UM22 224 aa8.79□□□□□ -1
SKA3-203ENST00000400018 PEX7O00628 323 aa8.79□□□□□ -1
SKA3-203ENST00000400018 TYMSP04818 313 aa8.79□□□□□ -1
SKA3-203ENST00000400018 CSN3P07498 182 aa8.79□□□□□ -1
SKA3-203ENST00000400018 TSPOP30536 169 aa8.79□□□□□ -1
SKA3-203ENST00000400018 FXYD7P58549 80 aa8.79□□□□□ -1
SKA3-203ENST00000400018 PAFAH1B2P68402 229 aa8.79□□□□□ -1
SKA3-203ENST00000400018 KRTAP21-3Q3LHN1 58 aa8.79□□□□□ -1
SKA3-203ENST00000400018 F2Z2F3 143 aa8.78□□□□□ -1
SKA3-203ENST00000400018 PRM2P04554 102 aa8.78□□□□□ -1
SKA3-203ENST00000400018 ATOH7Q8N100 152 aa8.78□□□□□ -1
SKA3-203ENST00000400018 Q8N976 141 aa8.78□□□□□ -1
SKA3-203ENST00000400018 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
SKA3-203ENST00000400018 MDFIQ99750 246 aa8.78□□□□□ -1
SKA3-203ENST00000400018 HELTA6NFD8 242 aa8.78□□□□□ -1
SKA3-203ENST00000400018 A6NJY4 79 aa8.78□□□□□ -1
SKA3-203ENST00000400018 PF4P02776 101 aa8.78□□□□□ -1
SKA3-203ENST00000400018 TCRAP04437 139 aa8.78□□□□□ -1
SKA3-203ENST00000400018 PSMG4Q5JS54 123 aa8.78□□□□□ -1
SKA3-203ENST00000400018 A0A1W2PRE2 83 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 GAGE12BA1L429 117 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 TMEM89A2RUT3 159 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 OVOL1O14753 267 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 LCN12Q6JVE5 192 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 NIT1Q86X76 327 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 ZC2HC1AQ96GY0 325 aa8.77□□□□□ -1.01
SKA3-203ENST00000400018 TMEM14CQ9P0S9 112 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms