RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 IFITM1P13164 125 aa11.7□□□□□ -0.54
ITSN1-210ENST00000399353 PPP1R27Q86WC6 154 aa11.7□□□□□ -0.54
ITSN1-210ENST00000399353 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
ITSN1-210ENST00000399353 PTPRBP23467 1997 aa11.7□□□□□ -0.54
ITSN1-210ENST00000399353 LYNX1G3V0Z9 82 aa11.7□□□□□ -0.54
ITSN1-210ENST00000399353 LYNX1P0DP58 116 aa11.7□□□□□ -0.54
ITSN1-210ENST00000399353 DTX2Q86UW9 622 aa11.7□□□□□ -0.54
ITSN1-210ENST00000399353 IGHV1-46P01743 117 aa11.69□□□□□ -0.54
ITSN1-210ENST00000399353 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
ITSN1-210ENST00000399353 IGLV2-11P01706 119 aa11.69□□□□□ -0.54
ITSN1-210ENST00000399353 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 TRAV4A0A0B4J268 109 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 F5H697 171 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 IGKV3-15P01624 115 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 HERVK_113P61574 105 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 GFRALQ6UXV0 394 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 DSCAMO60469 2012 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 SLC25A20O43772 301 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 MDS2Q8NDY4 140 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
ITSN1-210ENST00000399353 FABP5P3A8MUU1 101 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 TCL1BO95988 128 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
ITSN1-210ENST00000399353 H7C1H1 209 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.54
ITSN1-210ENST00000399353 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 C15orf53Q8NAA6 179 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 GAFA1Q96PS6 74 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 ANKHD1Q8IWZ3 2542 aaKnown RBP11.67□□□□□ -0.54
ITSN1-210ENST00000399353 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
ITSN1-210ENST00000399353 TRGV3P03979 118 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 PLNP26678 52 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 NDUFV3P56181 108 aaKnown RBP11.66□□□□□ -0.54
ITSN1-210ENST00000399353 FHL3Q13643 280 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 PSMG4Q5JS54 123 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 SIGLEC15Q6ZMC9 328 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 TMEM200BQ69YZ2 307 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 PRR25Q96S07 402 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 TSPAN13O95857 204 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
ITSN1-210ENST00000399353 ZNF80P51504 273 aaPredicted RBP11.66□□□□□ -0.54
ITSN1-210ENST00000399353 DLX6P56179 175 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 ZNF56Q15929 161 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
ITSN1-210ENST00000399353 ECSCRQ19T08 205 aa11.66□□□□□ -0.54
ITSN1-210ENST00000399353 PLEKHB2Q96CS7 222 aa11.65□□□□□ -0.54
ITSN1-210ENST00000399353 SORL1Q92673 2214 aa11.65□□□□□ -0.54
ITSN1-210ENST00000399353 A0A087WX48 190 aa11.65□□□□□ -0.54
ITSN1-210ENST00000399353 NPC2P61916 151 aa11.65□□□□□ -0.54
ITSN1-210ENST00000399353 ID1P41134 155 aa11.65□□□□□ -0.55
ITSN1-210ENST00000399353 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.55
ITSN1-210ENST00000399353 RNF182Q8N6D2 247 aa11.65□□□□□ -0.55
ITSN1-210ENST00000399353 UBTD1Q9HAC8 227 aa11.65□□□□□ -0.55
ITSN1-210ENST00000399353 F8VRH5 84 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 MORN3Q6PF18 240 aaPredicted RBP11.64□□□□□ -0.55
ITSN1-210ENST00000399353 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 TAL2Q16559 108 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 C1orf162Q8NEQ5 155 aaPredicted RBP11.64□□□□□ -0.55
ITSN1-210ENST00000399353 LGALS1P09382 135 aaKnown RBP11.64□□□□□ -0.55
ITSN1-210ENST00000399353 LYPD2Q6UXB3 125 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 Q6ZQT7 251 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 CTSZQ9UBR2 303 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 PRO0461Q9UI25 63 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 SLC25A15Q9Y619 301 aa11.64□□□□□ -0.55
ITSN1-210ENST00000399353 TM4SF5O14894 197 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 Q8N8P6 123 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 COL4A2P08572 1712 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 TCF15Q12870 199 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 VCX2Q9H322 139 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 FSTL3O95633 263 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
ITSN1-210ENST00000399353 CRLF1O75462 422 aa11.62□□□□□ -0.55
ITSN1-210ENST00000399353 LGALS3P17931 250 aaKnown RBP11.62□□□□□ -0.55
ITSN1-210ENST00000399353 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
ITSN1-210ENST00000399353 AJUBAQ96IF1 538 aa11.62□□□□□ -0.55
ITSN1-210ENST00000399353 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
ITSN1-210ENST00000399353 C17orf100A8MU93 164 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 WT1P19544 449 aaPredicted RBP11.61□□□□□ -0.55
ITSN1-210ENST00000399353 SIGLEC9Q9Y336 463 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 TLN1Q9Y490 2541 aaKnown RBP11.61□□□□□ -0.55
ITSN1-210ENST00000399353 CGB3P0DN86 165 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 CGB7P0DN87 165 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 ZNF833PQ6ZTB9 187 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 C14orf178Q8N769 122 aaPredicted RBP11.61□□□□□ -0.55
ITSN1-210ENST00000399353 TRAV12-3A0A0B4J271 114 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 ZNF474Q6S9Z5 364 aaPredicted RBP11.61□□□□□ -0.55
ITSN1-210ENST00000399353 IL17RELQ6ZVW7 336 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 TIMD4Q96H15 378 aa11.61□□□□□ -0.55
ITSN1-210ENST00000399353 COL5A1P20908 1838 aaPredicted RBP11.61□□□□□ -0.55
ITSN1-210ENST00000399353 RPL13AP40429 203 aaKnown RBP11.6□□□□□ -0.55
ITSN1-210ENST00000399353 CHCHD5Q9BSY4 110 aa11.6□□□□□ -0.55
ITSN1-210ENST00000399353 SPRY4Q9C004 299 aa11.6□□□□□ -0.55
ITSN1-210ENST00000399353 ASPMQ8IZT6 3477 aa11.6□□□□□ -0.55
ITSN1-210ENST00000399353 ADIPOQQ15848 244 aa11.6□□□□□ -0.55
ITSN1-210ENST00000399353 ZNF491Q8N8L2 437 aa11.6□□□□□ -0.55
ITSN1-210ENST00000399353 YAE1D1Q9NRH1 226 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms