RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 COL5A1-AS1Q5SY13 56 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 HIST1H4GQ99525 98 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 A6NDN8 102 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 ZNF292O60281 2723 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 LINC00587B1AMM8 73 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
SNX9-201ENST00000392185 PAPPA-AS1Q5QFB9 102 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
SNX9-201ENST00000392185 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 A0A1W2PPR1 153 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 GP9P14770 177 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 SRSF1Q07955 248 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX9-201ENST00000392185 SMAGPQ0VAQ4 97 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 ZNF876PQ49A33 203 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 ARL6IP6Q8N6S5 226 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 ZNF492Q9P255 531 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 TCF21O43680 179 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 SLAQ13239 276 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
SNX9-201ENST00000392185 CRXO43186 299 aaPredicted RBP12.86□□□□□ -0.35
SNX9-201ENST00000392185 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
SNX9-201ENST00000392185 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
SNX9-201ENST00000392185 RASL11AQ6T310 242 aa12.86□□□□□ -0.35
SNX9-201ENST00000392185 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
SNX9-201ENST00000392185 CRYGCP07315 174 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 SLURP1P55000 103 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 DEFB1P60022 68 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 DNLZQ5SXM8 178 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 C12orf54Q6X4T0 127 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 DPH3P1Q9H4G8 78 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 CYSLTR1Q9Y271 337 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 IFI27P40305 119 aaPredicted RBP12.85□□□□□ -0.35
SNX9-201ENST00000392185 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
SNX9-201ENST00000392185 LOC102724200A0A096LPH7 203 aaPredicted RBP12.85□□□□□ -0.35
SNX9-201ENST00000392185 ODF3BA8MYP8 253 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 ANXA2RQ3ZCQ2 193 aa12.85□□□□□ -0.35
SNX9-201ENST00000392185 CFHR4Q92496 578 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 VPS13AQ96RL7 3174 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 BUB3O43684 328 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 TMEM190Q8WZ59 177 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 CPAMD8Q8IZJ3 1885 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 CHCHD1Q96BP2 118 aaKnown RBP12.84□□□□□ -0.35
SNX9-201ENST00000392185 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
SNX9-201ENST00000392185 IGKV1D-37A0A075B6S9 117 aa12.83□□□□□ -0.36
SNX9-201ENST00000392185 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
SNX9-201ENST00000392185 VCX2Q9H322 139 aa12.83□□□□□ -0.36
SNX9-201ENST00000392185 TOMM7Q9P0U1 55 aa12.83□□□□□ -0.36
SNX9-201ENST00000392185 FOXE3Q13461 319 aa12.83□□□□□ -0.36
SNX9-201ENST00000392185 RPL24P83731 157 aaKnown RBP12.83□□□□□ -0.36
SNX9-201ENST00000392185 INSP01308 110 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 DEFB130BP0DP73 79 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 DEFB130AP0DP74 79 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 A8MWP6 167 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 INS-IGF2F8WCM5 200 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 IGHG2P01859 326 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 ORMDL2Q53FV1 153 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 MS4A6AQ9H2W1 248 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 LOC107984156A0A0G2JMH3 177 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 H3BUA1 57 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 MEIG1Q5JSS6 88 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 ARL17AQ8IVW1 177 aa12.82□□□□□ -0.36
SNX9-201ENST00000392185 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
SNX9-201ENST00000392185 COTL1Q14019 142 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 CT83Q5H943 113 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 EGR2P11161 476 aaPredicted RBP12.81□□□□□ -0.36
SNX9-201ENST00000392185 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
SNX9-201ENST00000392185 TMEM158Q8WZ71 300 aa12.81□□□□□ -0.36
SNX9-201ENST00000392185 TYMSP04818 313 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 CDKN1BP46527 198 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 TRAV9-2A0A087WT02 112 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 TRAV26-2A0A0B4J265 109 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 IGHV3-16A0A0C4DH30 117 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 PLP1P60201 277 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 CFHR3Q02985 330 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 LAGE3Q14657 143 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 FAM104BQ5XKR9 115 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 TMEM101Q96IK0 257 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 TNFRSF6BO95407 300 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 LTAP01374 205 aa12.8□□□□□ -0.36
SNX9-201ENST00000392185 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 CCL24O00175 119 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 OR2K2Q8NGT1 345 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 PET117Q6UWS5 81 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 ZNF503Q96F45 646 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 CHCHD5Q9BSY4 110 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 IGHV3-64A0A075B6Q5 118 aa12.79□□□□□ -0.36
SNX9-201ENST00000392185 SMIM27A0A1W2PRY6 76 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms