RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 ZNF142P52746 1687 aaPredicted RBP0.4□□□□□ -2.35
RNU6-278P-201ENST00000390945 TRAV13-1A0A0B4J241 112 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 C3orf85A0A1B0GTC6 90 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 PRH1P02810 166 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 TPT1P13693 172 aaKnown RBP0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 SRP9P49458 86 aaKnown RBP0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 CCSMST1Q4G0I0 132 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 C10orf99Q6UWK7 81 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 TEX29Q8N6K0 151 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 CCDC115Q96NT0 180 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 LXNQ9BS40 222 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 MPC1Q9Y5U8 109 aa0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 CDK12Q9NYV4 1490 aaPredicted RBP0.39□□□□□ -2.35
RNU6-278P-201ENST00000390945 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 MED23Q9ULK4 1368 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 LOC107986453A0A1B0GWG9 222 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 NUPR2A6NF83 97 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 C5orf58C9J3I9 102 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 IFNA21P01568 189 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 CRYGSP22914 178 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 TMEM128Q5BJH2 165 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 SAMD13Q5VXD3 122 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 OR9Q1Q8NGQ5 310 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 FKBP11Q9NYL4 201 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 BOKQ9UMX3 212 aaPredicted RBP0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 ARHGAP31Q2M1Z3 1444 aa0.38□□□□□ -2.35
RNU6-278P-201ENST00000390945 BDP1A6H8Y1 2624 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 PLXNA1Q9UIW2 1896 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 KMT2DO14686 5537 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 KIF13AQ9H1H9 1805 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 NBDYA0A0U1RRE5 68 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 KRTAP2-3P0C7H8 128 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 B2MP61769 119 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 Q5XG85 94 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 CSAG1Q6PB30 78 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 TCTEX1D1Q8N7M0 179 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 OR5A2Q8NGI9 324 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 GRPEL2Q8TAA5 225 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 KRTAP2-4Q9BYR9 128 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 KRTAP2-1Q9BYU5 128 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 C19orf12Q9NSK7 152 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 TRAPPC2LQ9UL33 140 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 NDUFAF1Q9Y375 327 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 DSPPQ9NZW4 1301 aa0.37□□□□□ -2.35
RNU6-278P-201ENST00000390945 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 H3BMG7 143 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 IGF2P01344 180 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 NEFHP12036 1026 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 RPL22P35268 128 aaKnown RBP0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 SPINT3P49223 89 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 ZNF137PP52743 207 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 ASB16-AS1Q495Z4 193 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 XAF1Q6GPH4 301 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 Q6ZS92 163 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 PLAC4Q8WY50 150 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 SMR3AQ99954 134 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 FAM103A1Q9BTL3 118 aaKnown RBP0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 OVOS2A0A0G2JMS6 1433 aa0.36□□□□□ -2.35
RNU6-278P-201ENST00000390945 TANC1Q9C0D5 1861 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 RBBP6Q7Z6E9 1792 aaKnown RBP0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 NBEAP1P0C6P0 100 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 SLC25A4P12235 298 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 DNAJB13P59910 316 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 SMIM15Q7Z3B0 74 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 Q86TA4 180 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 MRPL35Q9NZE8 188 aaKnown RBP0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
RNU6-278P-201ENST00000390945 CASZ1Q86V15 1759 aa0.34□□□□□ -2.35
RNU6-278P-201ENST00000390945 ABCA1O95477 2261 aa0.34□□□□□ -2.35
RNU6-278P-201ENST00000390945 A0A1W2PPB8 328 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 A0A1W2PRS3 328 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 ARL5CA6NH57 179 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 IFITM5A6NNB3 132 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 KIR3DP1A8MWS1 328 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 HBDP02042 147 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 GYPBP06028 91 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 CAV3P56539 151 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 C3orf62Q6ZUJ4 267 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 C5orf17Q8NAS9 161 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 BRK1Q8WUW1 75 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 JPT1Q9UK76 154 aa0.34□□□□□ -2.36
RNU6-278P-201ENST00000390945 SPAG17Q6Q759 2223 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 BLMP54132 1417 aaPredicted RBP0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 MAST4O15021 2626 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 A0A1B0GX51 115 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 M0QZK8 103 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 EDF1O60869 148 aaKnown RBP0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 SULT1C4O75897 302 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 EVI2AP22794 236 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 BLCAPP62952 87 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 QRFPP83859 136 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 FXYD3Q14802 87 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 GLYATL3Q5SZD4 288 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 C6orf52Q5T4I8 152 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 TMEM229BQ8NBD8 167 aa0.33□□□□□ -2.36
RNU6-278P-201ENST00000390945 ZCCHC6Q5VYS8 1495 aaKnown RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms