RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 OTOGLQ3ZCN5 2332 aa11.62□□□□□ -0.55
CTNS-202ENST00000381870 MALRD1Q5VYJ5 2156 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 TGFAP01135 160 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 TMEM78Q5T7P6 136 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 ZNF474Q6S9Z5 364 aaPredicted RBP11.61□□□□□ -0.55
CTNS-202ENST00000381870 C22orf34Q6ZV56 151 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 DMXL2Q8TDJ6 3036 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 DLX6P56179 175 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 ZFAND6Q6FIF0 208 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 SEM1Q6ZVN7 128 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 NRACQ8N912 160 aa11.61□□□□□ -0.55
CTNS-202ENST00000381870 F8VRH5 84 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 H7C1H1 209 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 NHLRC4P0CG21 123 aaPredicted RBP11.6□□□□□ -0.55
CTNS-202ENST00000381870 IGHV1-8P0DP01 117 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 UBE2D3P61077 147 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 UBE2D2P62837 147 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 ANXA2RQ3ZCQ2 193 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 KLK15Q9H2R5 256 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 TCL1BO95988 128 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 IGHG4P01861 327 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 UBE2D1P51668 147 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 ERCC8Q13216 396 aa11.6□□□□□ -0.55
CTNS-202ENST00000381870 ROS1P08922 2347 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 H3BVH4 76 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 CDX4O14627 284 aaPredicted RBP11.59□□□□□ -0.55
CTNS-202ENST00000381870 NDUFB3O43676 98 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
CTNS-202ENST00000381870 TEX29Q8N6K0 151 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 RAXQ9Y2V3 346 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 CNIH1O95406 144 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 SHISA2Q6UWI4 295 aa11.59□□□□□ -0.55
CTNS-202ENST00000381870 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 CFHR4Q92496 578 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 ZNF815PA8K554 130 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
CTNS-202ENST00000381870 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 ANKRD29Q8N6D5 301 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 CCL17Q92583 94 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
CTNS-202ENST00000381870 CNOT1A5YKK6 2376 aaKnown RBP11.57□□□□□ -0.56
CTNS-202ENST00000381870 A6NJY4 79 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 TMEM155Q4W5P6 130 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 CITED1Q99966 193 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 VKORC1Q9BQB6 163 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 SRSF2Q01130 221 aaKnown RBP11.57□□□□□ -0.56
CTNS-202ENST00000381870 DYNAPQ8N1N2 210 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 SMAD5-AS1Q9Y6J3 95 aa11.57□□□□□ -0.56
CTNS-202ENST00000381870 SPTBN2O15020 2390 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 IGKV3D-20A0A0C4DH25 116 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 A8MWV9 139 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 PRAC2D3DTV9 90 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 CD7P09564 240 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 BOD1L1Q8NFC6 3051 aa11.56□□□□□ -0.56
CTNS-202ENST00000381870 SLC25A16P16260 332 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 KLHL30-AS1Q8NEE0 82 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 IGHV3OR16-8A0A075B7F1 116 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 TMEM178BH3BS89 294 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 IL17RELQ6ZVW7 336 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
CTNS-202ENST00000381870 TRBV20-1A0A075B6N2 111 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 NDUFA11Q86Y39 141 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 VCX2Q9H322 139 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 GVINP1Q7Z2Y8 2422 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 C17orf100A8MU93 164 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 ZNF672Q499Z4 452 aaPredicted RBP11.54□□□□□ -0.56
CTNS-202ENST00000381870 NEXN-AS1Q8NBZ9 246 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 FDCSPQ8NFU4 85 aa11.54□□□□□ -0.56
CTNS-202ENST00000381870 TRBV7-9A0A0J9YWB2 115 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 CCDC179H3BU77 68 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
CTNS-202ENST00000381870 PRTN3P24158 256 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 HERV-K104P63124 156 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 IGFBPL1Q8WX77 278 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 BUB1B-PAK6H3BSN5 160 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 IGLV1-47P01700 117 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 CD59P13987 128 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 FAM27E3Q08E93 113 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 RASL10AQ92737 203 aa11.53□□□□□ -0.56
CTNS-202ENST00000381870 F8W735 103 aaPredicted RBP11.52□□□□□ -0.56
CTNS-202ENST00000381870 COX6B1P14854 86 aa11.52□□□□□ -0.56
CTNS-202ENST00000381870 SRD5A1P18405 259 aa11.52□□□□□ -0.56
CTNS-202ENST00000381870 Q6ZQT7 251 aa11.52□□□□□ -0.56
CTNS-202ENST00000381870 RNF182Q8N6D2 247 aa11.52□□□□□ -0.56
CTNS-202ENST00000381870 RHODO00212 210 aa11.52□□□□□ -0.57
CTNS-202ENST00000381870 CRLF1O75462 422 aa11.52□□□□□ -0.57
CTNS-202ENST00000381870 COX7A1P24310 79 aa11.52□□□□□ -0.57
CTNS-202ENST00000381870 RAB1BQ9H0U4 201 aa11.52□□□□□ -0.57
CTNS-202ENST00000381870 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms