RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 Q6AWC8 147 aa10.83□□□□□ -0.67
SDC1-202ENST00000381150 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.67
SDC1-202ENST00000381150 PTPRQQ9UMZ3 2332 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 A0A1B0GW15 77 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 NCBP2LA6PVI3 153 aaKnown RBP10.83□□□□□ -0.68
SDC1-202ENST00000381150 LYNX1G3V0Z9 82 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 LYNX1P0DP58 116 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 MC5RP33032 325 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 ERCC8Q13216 396 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 VKORC1Q9BQB6 163 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 PGPEP1Q9NXJ5 209 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 WI2-2373I1.2A0A1W2PRP0 233 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 DYNLRB1Q9NP97 96 aa10.83□□□□□ -0.68
SDC1-202ENST00000381150 INS-IGF2F8WCM5 200 aa10.82□□□□□ -0.68
SDC1-202ENST00000381150 ZNF80P51504 273 aaPredicted RBP10.82□□□□□ -0.68
SDC1-202ENST00000381150 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
SDC1-202ENST00000381150 TMEM155Q4W5P6 130 aa10.82□□□□□ -0.68
SDC1-202ENST00000381150 ZNF502Q8TBZ5 544 aa10.82□□□□□ -0.68
SDC1-202ENST00000381150 DPF1Q92782 380 aa10.82□□□□□ -0.68
SDC1-202ENST00000381150 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
SDC1-202ENST00000381150 EMP1P54849 157 aa10.81□□□□□ -0.68
SDC1-202ENST00000381150 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
SDC1-202ENST00000381150 VSTM5A8MXK1 200 aa10.81□□□□□ -0.68
SDC1-202ENST00000381150 H7C2G1 150 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 CRYGCP07315 174 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 OR11H12B2RN74 326 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 SCGB1C2P0DMR2 95 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 OR11H1Q8NG94 326 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 OR11H2Q8NH07 326 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 SS18L2Q9UHA2 77 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.8□□□□□ -0.68
SDC1-202ENST00000381150 MT-ATP8P03928 68 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 ZNF491Q8N8L2 437 aa10.8□□□□□ -0.68
SDC1-202ENST00000381150 E9PLD3 99 aa10.79□□□□□ -0.68
SDC1-202ENST00000381150 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
SDC1-202ENST00000381150 RNF182Q8N6D2 247 aa10.79□□□□□ -0.68
SDC1-202ENST00000381150 LINC01549A6NIU2 74 aa10.79□□□□□ -0.68
SDC1-202ENST00000381150 PRR25Q96S07 402 aa10.79□□□□□ -0.68
SDC1-202ENST00000381150 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
SDC1-202ENST00000381150 B9A039 149 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
SDC1-202ENST00000381150 MRAP2Q96G30 205 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 ONECUT1Q9UBC0 465 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 OVOL3O00110 214 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 TRGV3P03979 118 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 GRNP28799 593 aaKnown RBP10.78□□□□□ -0.68
SDC1-202ENST00000381150 SPANXN1Q5VSR9 72 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 ZNF493Q6ZR52 646 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 LINC01560Q8TB33 94 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 FBXL19-AS1Q494R0 122 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 DTX2Q86UW9 622 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 MSRB2Q9Y3D2 182 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
SDC1-202ENST00000381150 GATA3P23771 443 aa10.77□□□□□ -0.68
SDC1-202ENST00000381150 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.77□□□□□ -0.696e-8■■■■□ 19.3
SDC1-202ENST00000381150 IGHV1-3A0A0C4DH29 117 aa10.77□□□□□ -0.69
SDC1-202ENST00000381150 CD3EP07766 207 aa10.77□□□□□ -0.69
SDC1-202ENST00000381150 RRN3P1Q2M238 152 aa10.77□□□□□ -0.69
SDC1-202ENST00000381150 ZFP2Q6ZN57 461 aa10.77□□□□□ -0.69
SDC1-202ENST00000381150 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
SDC1-202ENST00000381150 NXT2Q9NPJ8 142 aaKnown RBP10.77□□□□□ -0.69
SDC1-202ENST00000381150 TMEM14CQ9P0S9 112 aa10.77□□□□□ -0.69
SDC1-202ENST00000381150 H3BRN7 92 aa10.76□□□□□ -0.69
SDC1-202ENST00000381150 TEX22C9J3V5 150 aa10.76□□□□□ -0.69
SDC1-202ENST00000381150 I3L2K1 104 aa10.76□□□□□ -0.69
SDC1-202ENST00000381150 IGLV1-47P01700 117 aa10.76□□□□□ -0.69
SDC1-202ENST00000381150 CDSNQ15517 529 aa10.76□□□□□ -0.69
SDC1-202ENST00000381150 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
SDC1-202ENST00000381150 ANKHD1Q8IWZ3 2542 aaKnown RBP10.76□□□□□ -0.69
SDC1-202ENST00000381150 ATP5LO75964 103 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 RNF183Q96D59 192 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 RAXQ9Y2V3 346 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 K7EIM0 57 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 M0R381 172 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 CRYGBP07316 175 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 TIMM23O14925 209 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 PRTN3P24158 256 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 FOXI1Q12951 378 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 IL17RELQ6ZVW7 336 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 KLHL30-AS1Q8NEE0 82 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
SDC1-202ENST00000381150 SORL1Q92673 2214 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 ZNF815PA8K554 130 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 PRAC2D3DTV9 90 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 Q6ZQT7 251 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 U3KQK5 164 aa10.74□□□□□ -0.69
SDC1-202ENST00000381150 MGPP08493 103 aa10.73□□□□□ -0.69
SDC1-202ENST00000381150 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
SDC1-202ENST00000381150 LAGE3Q14657 143 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms