RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PGPA6NDG6 321 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 NTN3O00634 580 aaPredicted RBP7.35□□□□□ -1.23
PTPRA-204ENST00000380393 WISP2O76076 250 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 GRPP07492 148 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 DTX2Q86UW9 622 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 MBD3L2Q8NHZ7 208 aaPredicted RBP7.35□□□□□ -1.23
PTPRA-204ENST00000380393 APC2O95996 2303 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 IGF2RP11717 2491 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 ACACAQ13085 2346 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 FAM27E3Q08E93 113 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 C1orf195Q5TG92 126 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 IMUPQ9GZP8 106 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 TRAV17A0A0B4J275 112 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 CKS2P33552 79 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 SLC25A39Q9BZJ4 359 aaPredicted RBP7.34□□□□□ -1.23
PTPRA-204ENST00000380393 CYSTM1Q9H1C7 97 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 LINC00473A8K010 186 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 J3QQQ9 107 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 DLL1O00548 723 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 FCGR3BO75015 233 aa7.34□□□□□ -1.23
PTPRA-204ENST00000380393 TPRP12270 2363 aaKnown RBP7.33□□□□□ -1.24
PTPRA-204ENST00000380393 MRPL33O75394 65 aaKnown RBP7.33□□□□□ -1.24
PTPRA-204ENST00000380393 IGHV4-39P01824 125 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 ATP5G1P05496 136 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 ZNF883P0CG24 379 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 FAM104BQ5XKR9 115 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 C8orf31Q8N9H6 132 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 WDR31Q8NA23 367 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 C10orf105Q8TEF2 133 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 SPANXDQ9BXN6 97 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 FOXA2Q9Y261 457 aaPredicted RBP7.33□□□□□ -1.24
PTPRA-204ENST00000380393 IGKV1OR2-108A0A075B7D4 117 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 H7C2G1 150 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 ZNF22P17026 224 aaPredicted RBP7.33□□□□□ -1.24
PTPRA-204ENST00000380393 MRPL51Q4U2R6 128 aaKnown RBP7.33□□□□□ -1.24
PTPRA-204ENST00000380393 PLCE1Q9P212 2302 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 TRAV3A0A0B4J244 114 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 ZNF815PA8K554 130 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 COX7A2P2O60397 106 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 DUTP33316 252 aaKnown RBP7.33□□□□□ -1.24
PTPRA-204ENST00000380393 ERVK-16P61578 105 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
PTPRA-204ENST00000380393 PLAUP00749 431 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 COX6A1P12074 109 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 LIFP15018 202 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 IL17RELQ6ZVW7 336 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 SMG1Q96Q15 3661 aaKnown RBP7.32□□□□□ -1.24
PTPRA-204ENST00000380393 PRR14LQ5THK1 2151 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 HLA-DMBP28068 263 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 RPS19BP1Q86WX3 136 aaKnown RBP7.32□□□□□ -1.24
PTPRA-204ENST00000380393 PRO1854Q9UHT4 67 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 U3KQK5 164 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 ZGRF1Q86YA3 2104 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 A0A0U1RQV1 116 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 FAM240AA0A1B0GVK7 77 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 MED13Q9UHV7 2174 aa7.32□□□□□ -1.24
PTPRA-204ENST00000380393 ANKRD11Q6UB99 2663 aaPredicted RBP7.31□□□□□ -1.24
PTPRA-204ENST00000380393 FKBP2P26885 142 aaKnown RBP7.31□□□□□ -1.24
PTPRA-204ENST00000380393 ATXN8Q156A1 80 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 TNCP24821 2201 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 DNAJC13O75165 2243 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 RP1L1Q8IWN7 2480 aaPredicted RBP7.31□□□□□ -1.24
PTPRA-204ENST00000380393 OVOL3O00110 214 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 CFC1BP0CG36 223 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 CFC1P0CG37 223 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 SLC25A16P16260 332 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 PRDX2P32119 198 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 EIF4EBP1Q13541 118 aaPredicted RBP7.31□□□□□ -1.24
PTPRA-204ENST00000380393 PRNTQ86SH4 94 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 PLEKHB2Q96CS7 222 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 PRORYQ9H606 182 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 RELNP78509 3460 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 TMEM170BQ5T4T1 132 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 GOLT1AQ6ZVE7 132 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 LINC00596Q86U02 117 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 VKORC1Q9BQB6 163 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 TPSG1Q9NRR2 321 aa7.31□□□□□ -1.24
PTPRA-204ENST00000380393 IGLV3-32A0A0A0MS00 114 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 PLNP26678 52 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 SSR4P51571 173 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 Q1RN00 199 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 MYOZ3Q8TDC0 251 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 C9orf85Q96MD7 179 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 DCTN5Q9BTE1 182 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 ABCA1O95477 2261 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 ICE1Q9Y2F5 2266 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 C12orf77C9JDV5 145 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 H3BTX0 84 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 K7ENP7 123 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 RFPL3SP0C7P2 107 aa7.3□□□□□ -1.24
PTPRA-204ENST00000380393 MDS2Q8NDY4 140 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms