RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 EDN2P20800 178 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 ATP5G2Q06055 141 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 Q8N1Y9 231 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 U3KQE9 123 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 TRAV25A0A0B4J276 109 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 A0A1B0GW15 77 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 TMEM213A2RRL7 107 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 FAM181BA6NEQ2 426 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 FBLL1A6NHQ2 334 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 H3BUX3 64 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 MSMBP08118 114 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 BLCAPP62952 87 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 FAM162BQ5T6X4 162 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 ERASQ7Z444 233 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 SPATA12Q7Z6I5 190 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 BORCS7Q96B45 105 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 NDFIP1Q9BT67 221 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 C20orf202A1L168 122 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 C2orf70A6NJV1 201 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 TRGV3P03979 118 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 CRYBA4P53673 196 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 LCNL1Q6ZST4 164 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 LINC00173Q6ZV60 143 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 BBC3Q96PG8 261 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 LRRK2Q5S007 2527 aa6.12□□□□□ -1.43
PDLIM5-204ENST00000380176 A0A087X0K7 114 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 TRAV8-2A0A0B4J237 113 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 COX8CQ7Z4L0 72 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 C20orf144Q9BQM9 153 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 KLK15Q9H2R5 256 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 IGHV1-24A0A0C4DH33 117 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 F8WDY8 70 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 CSN3P07498 182 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 CTRLP40313 264 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 CRIP2P52943 208 aaPredicted RBP6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 RIGQ13278 110 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 UNQ9165/PRO28630Q6UXU0 137 aa6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF705AQ6ZN79 300 aaPredicted RBP6.11□□□□□ -1.43
PDLIM5-204ENST00000380176 A6NDX4 124 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 PPIFP30405 207 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 IL17RELQ6ZVW7 336 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 METTL26Q96S19 204 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 X6R8D5 127 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 IGHV3-11P01762 117 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 IGF1P05019 195 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 TIRAPP58753 221 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 HERV-K104P63124 156 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 GATD1Q8NB37 220 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 YAE1D1Q9NRH1 226 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 NBPF19A0A087WUL8 3843 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 FAM223BA6NKX1 122 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 IGHG2P01859 326 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 RAB9AP51151 201 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 SPATA45Q537H7 98 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 FAM223AQ8IWN6 122 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 MAPK1IP1LQ8NDC0 245 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 ORAOV1Q8WV07 137 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 MIEN1Q9BRT3 115 aa6.1□□□□□ -1.43
PDLIM5-204ENST00000380176 SRSF1Q07955 248 aaKnown RBP eCLIP6.09□□□□□ -1.43
PDLIM5-204ENST00000380176 Q6AWC8 147 aa6.09□□□□□ -1.43
PDLIM5-204ENST00000380176 Q6ZQT7 251 aa6.09□□□□□ -1.43
PDLIM5-204ENST00000380176 AMN1Q8IY45 258 aa6.09□□□□□ -1.43
PDLIM5-204ENST00000380176 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
PDLIM5-204ENST00000380176 UBR5O95071 2799 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-204ENST00000380176 B4DSR2 109 aa6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 ORM1P02763 201 aa6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 FAM106AQ4KMX7 169 aa6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 ZNF493Q6ZR52 646 aa6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 CHCHD1Q96BP2 118 aaKnown RBP6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 MSRB1Q9NZV6 116 aa6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 SELENOKQ9Y6D0 94 aa6.09□□□□□ -1.44
PDLIM5-204ENST00000380176 PTPN13Q12923 2485 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 A1L4Q6 167 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 IGLC6P0CF74 106 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 FHL3Q13643 280 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 SLC50A1Q9BRV3 221 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 DOPEY2Q9Y3R5 2298 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 D6R8Y8 96 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 FER1L6-AS1Q8NA97 138 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 MCRIP2Q9BUT9 160 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 TIMM8BQ9Y5J9 83 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 ABCA12Q86UK0 2595 aa6.08□□□□□ -1.44
PDLIM5-204ENST00000380176 TRBV7-9A0A0J9YWB2 115 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 FABP5P3A8MUU1 101 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 LEPROTL1O95214 131 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 DEFB1P60022 68 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 TWIST1Q15672 202 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 GPHB5Q86YW7 130 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 C20orf173Q96LM9 149 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms