RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PSCAO43653 123 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 TRGV9Q99603 122 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 H0YGX0 51 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 LINC01620Q4KN68 170 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 HERVK_113P63121 156 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 PAX8Q06710 450 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 VSIG2Q96IQ7 327 aa11.28□□□□□ -0.6
RAPGEF1-202ENST00000372190 NCOR1O75376 2440 aa11.27□□□□□ -0.6
RAPGEF1-202ENST00000372190 CFHR2P36980 270 aa11.27□□□□□ -0.6
RAPGEF1-202ENST00000372190 NXPH4O95158 308 aa11.27□□□□□ -0.61
RAPGEF1-202ENST00000372190 UBE2AP49459 152 aa11.27□□□□□ -0.61
RAPGEF1-202ENST00000372190 LYPD2Q6UXB3 125 aa11.27□□□□□ -0.61
RAPGEF1-202ENST00000372190 ZNF493Q6ZR52 646 aa11.27□□□□□ -0.61
RAPGEF1-202ENST00000372190 A0A087WWL8 130 aa11.27□□□□□ -0.61
RAPGEF1-202ENST00000372190 SPTBN2O15020 2390 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 NDPQ00604 133 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 HGFACQ04756 655 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 KLHL30-AS1Q8NEE0 82 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 RFNGQ9Y644 331 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 WT1P19544 449 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 PRO3102Q9H379 93 aa11.26□□□□□ -0.61
RAPGEF1-202ENST00000372190 UBE2DNLQ8IWF7 75 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 JMJD7-PLA2G4BH0Y9G9 81 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 LRRC75A-AS1Q8N1F1 130 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 RNF152Q8N8N0 203 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 Q8TAT8 98 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 PTPRDP23468 1912 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 DOCK8Q8NF50 2099 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 CACNA1GO43497 2377 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 TMEM213A2RRL7 107 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 K7EM74 188 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 C20orf197Q8N268 126 aa11.25□□□□□ -0.61
RAPGEF1-202ENST00000372190 SDK2Q58EX2 2172 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 IGKV1-27A0A075B6S5 117 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 SAA4P35542 130 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 A6NED7 52 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 TRBV10-2A0A0K0K1G8 114 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 M0QXV9 152 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 PROK2Q9HC23 129 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 FANCMQ8IYD8 2048 aa11.24□□□□□ -0.61
RAPGEF1-202ENST00000372190 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 ARTNQ5T4W7 220 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 FAM215AQ9Y5M1 114 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 H3BT86 120 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 DOCK9Q9BZ29 2069 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 ELANEP08246 267 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 CFHR4Q92496 578 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 ANAPC1Q9H1A4 1944 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 C10orf91Q5T1B1 145 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 SLX1AQ9BQ83 275 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 ACACAQ13085 2346 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
RAPGEF1-202ENST00000372190 TRAV4A0A0B4J268 109 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 NDUFS7O75251 213 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 C10orf105Q8TEF2 133 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 J3QLI3 93 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 FOXE3Q13461 319 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 PSPNO60542 156 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 RNF5Q99942 180 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 QRFPP83859 136 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 MLST8Q9BVC4 326 aa11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 KLF2Q9Y5W3 355 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF1-202ENST00000372190 TIMM17BO60830 172 aa11.21□□□□□ -0.61
RAPGEF1-202ENST00000372190 IGKV1D-17A0A075B6S4 117 aa11.21□□□□□ -0.61
RAPGEF1-202ENST00000372190 DEFB105AQ8NG35 78 aa11.21□□□□□ -0.61
RAPGEF1-202ENST00000372190 FAM186AA6NE01 2351 aa11.21□□□□□ -0.62
RAPGEF1-202ENST00000372190 C15orf32Q32M92 178 aa11.21□□□□□ -0.62
RAPGEF1-202ENST00000372190 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 WIPF3A6NGB9 483 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 DYNAPQ8N1N2 210 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 NDUFA7O95182 113 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 FOXL2NBQ6ZUU3 175 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 WIPF2Q8TF74 440 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 IGHV1-69DA0A0B4J2H0 117 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 NDUFC1O43677 76 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
RAPGEF1-202ENST00000372190 C9JQL5 133 aa11.19□□□□□ -0.62
RAPGEF1-202ENST00000372190 DEFB113Q30KQ7 82 aa11.19□□□□□ -0.62
RAPGEF1-202ENST00000372190 UBE2E1P51965 193 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms