RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CREBBPQ92793 2442 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 MOSP00540 346 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 ZNF137PP52743 207 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 UTF1Q5T230 341 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 SH2D6Q7Z4S9 175 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 TEX29Q8N6K0 151 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 FAM216BQ8N7L0 139 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 LINC01587Q99440 93 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 PRSS46E5RG02 174 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 GCHFRP30047 84 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 TAS2R45P59539 299 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 ERVK-16P61578 105 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 MRPL23Q16540 153 aaKnown RBP5.38□□□□□ -1.55
CSDE1-204ENST00000369530 CENPWQ5EE01 88 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 NFE4Q86UQ8 179 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 C8orf31Q8N9H6 132 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 PPDPFLQ8WWR9 84 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 COQ2Q96H96 371 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 SPANXDQ9BXN6 97 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
CSDE1-204ENST00000369530 DYNC1H1Q14204 4646 aaKnown RBP5.38□□□□□ -1.55
CSDE1-204ENST00000369530 LYNX1G3V0Z9 82 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 MGST3O14880 152 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 SLC25A5P05141 298 aaKnown RBP5.37□□□□□ -1.55
CSDE1-204ENST00000369530 LYNX1P0DP58 116 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 TCTAP57738 103 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 FGFRL1Q8N441 504 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 FAM168AQ92567 244 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 APOMO95445 188 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 ARL14EPLP0DKL9 152 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 Q6YL49 198 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 APOA2P02652 100 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 MYOD1P15172 320 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 CFHR3Q02985 330 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 ABHD12Q8N2K0 398 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 Q8N6K4 173 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 NUP35Q8NFH5 326 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 DAZAP1Q96EP5 407 aaKnown RBP5.37□□□□□ -1.55
CSDE1-204ENST00000369530 CARD19Q96LW7 228 aa5.37□□□□□ -1.55
CSDE1-204ENST00000369530 MBNL3Q9NUK0 354 aaKnown RBP5.37□□□□□ -1.55
CSDE1-204ENST00000369530 TCRBV4S1A1TA0A5B7 111 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 NDUFA7O95182 113 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 RTL8BQ17RB0 113 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 PRR31Q5SQ13 230 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 IBA57Q5T440 356 aaKnown RBP5.36□□□□□ -1.55
CSDE1-204ENST00000369530 VKORC1L1Q8N0U8 176 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 MYOZ3Q8TDC0 251 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 S1PR3Q99500 378 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 GFRA4Q9GZZ7 299 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 LSM4Q9Y4Z0 139 aaKnown RBP5.36□□□□□ -1.55
CSDE1-204ENST00000369530 LINC01546A6NGU7 62 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 PRSS29PA6NIE9 313 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 HMGB3O15347 200 aaKnown RBP5.36□□□□□ -1.55
CSDE1-204ENST00000369530 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
CSDE1-204ENST00000369530 MSMBP08118 114 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 PRB3Q04118 309 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-204ENST00000369530 RRN3P1Q2M238 152 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 RPL39P5Q59GN2 51 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 MRAPQ8TCY5 172 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 HILPDAQ9Y5L2 63 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 NPIPB5A8MRT5 1133 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 FXYD2P54710 66 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 PSG5Q15238 335 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 PPP1R27Q86WC6 154 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 CEND1Q8N111 149 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 TMEM86BQ8N661 226 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 OR11H6Q8NGC7 330 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 ENY2Q9NPA8 101 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 CALYQ9NYX4 217 aa5.36□□□□□ -1.55
CSDE1-204ENST00000369530 C15orf62A8K5M9 175 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 NDUFB3O43676 98 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 EBI3Q14213 229 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 RNF152Q8N8N0 203 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 TMEM158Q8WZ71 300 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
CSDE1-204ENST00000369530 A0A1W2PPI3 338 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 ENSAO43768 121 aaKnown RBP5.35□□□□□ -1.55
CSDE1-204ENST00000369530 TNFRSF6BO95407 300 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 IGLV1-47P01700 117 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 IFITM1P13164 125 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 RPL30P62888 115 aaKnown RBP5.35□□□□□ -1.55
CSDE1-204ENST00000369530 TEN1Q86WV5 123 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 ZNRF2Q8NHG8 242 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 LINC00479Q96M42 142 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
CSDE1-204ENST00000369530 RNASE7Q9H1E1 156 aaKnown RBP5.35□□□□□ -1.55
CSDE1-204ENST00000369530 ARHGAP32A7KAX9 2087 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 TEX50A0A1B0GTY4 177 aa5.35□□□□□ -1.55
CSDE1-204ENST00000369530 CSN3P07498 182 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 ZNF688P0C7X2 276 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 BAALCQ8WXS3 180 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 TMEM190Q8WZ59 177 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 PRSS22Q9GZN4 317 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 TMEM167BQ9NRX6 74 aa5.34□□□□□ -1.55
CSDE1-204ENST00000369530 A0A096LNJ9 63 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms