RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 IGFL3Q6UXB1 125 aa11.82□□□□□ -0.52
VAT1-201ENST00000355653 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
VAT1-201ENST00000355653 COX8CQ7Z4L0 72 aa11.82□□□□□ -0.52
VAT1-201ENST00000355653 FAM57AQ8TBR7 257 aa11.82□□□□□ -0.52
VAT1-201ENST00000355653 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
VAT1-201ENST00000355653 APC2O95996 2303 aa11.82□□□□□ -0.52
VAT1-201ENST00000355653 CFHR4Q92496 578 aa11.81□□□□□ -0.52
VAT1-201ENST00000355653 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
VAT1-201ENST00000355653 NCBP2LA6PVI3 153 aaKnown RBP11.81□□□□□ -0.52
VAT1-201ENST00000355653 KLK15Q9H2R5 256 aa11.81□□□□□ -0.52
VAT1-201ENST00000355653 BSNQ9UPA5 3926 aa11.81□□□□□ -0.52
VAT1-201ENST00000355653 IGHV3-66A0A0C4DH42 116 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 E7EQL1 145 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 SPTBN2O15020 2390 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 LAGE3Q14657 143 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 RNF5Q99942 180 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 A0A1B0GWB2 263 aa11.8□□□□□ -0.52
VAT1-201ENST00000355653 IGLV2-18A0A075B6J9 118 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 IGHV3OR16-13A0A075B7E8 117 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 IGHV3-74A0A0B4J1X5 117 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 SRSF1Q07955 248 aaKnown RBP eCLIP11.79□□□□□ -0.52
VAT1-201ENST00000355653 KLRD1Q13241 179 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 SFTA2Q6UW10 78 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 SPATA25Q9BR10 227 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 RAB9AP51151 201 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
VAT1-201ENST00000355653 ACACAQ13085 2346 aa11.78□□□□□ -0.52
VAT1-201ENST00000355653 A0A087WX48 190 aa11.78□□□□□ -0.52
VAT1-201ENST00000355653 NDPQ00604 133 aa11.78□□□□□ -0.52
VAT1-201ENST00000355653 CACNA1BQ00975 2339 aa11.78□□□□□ -0.52
VAT1-201ENST00000355653 ANKRD11Q6UB99 2663 aaPredicted RBP11.78□□□□□ -0.52
VAT1-201ENST00000355653 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
VAT1-201ENST00000355653 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
VAT1-201ENST00000355653 CKS1BP61024 79 aa11.77□□□□□ -0.52
VAT1-201ENST00000355653 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.52
VAT1-201ENST00000355653 LINC01559Q495D7 138 aa11.77□□□□□ -0.52
VAT1-201ENST00000355653 APOMO95445 188 aa11.77□□□□□ -0.53
VAT1-201ENST00000355653 CTSGP08311 255 aa11.77□□□□□ -0.53
VAT1-201ENST00000355653 TAL2Q16559 108 aa11.77□□□□□ -0.53
VAT1-201ENST00000355653 DPM3Q9P2X0 92 aa11.77□□□□□ -0.53
VAT1-201ENST00000355653 HLA-DRB4P13762 266 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 PLNP26678 52 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 Q6ZQT7 251 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 HLA-DRB4X5D2U9 266 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 ZFHX2Q9C0A1 2572 aaPredicted RBP11.76□□□□□ -0.53
VAT1-201ENST00000355653 OR11H12B2RN74 326 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 SCGB2A2Q13296 93 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 SPANXN1Q5VSR9 72 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 NRACQ8N912 160 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 OR11H1Q8NG94 326 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 PSMG3-AS1Q96PY0 264 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
VAT1-201ENST00000355653 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
VAT1-201ENST00000355653 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
VAT1-201ENST00000355653 ASH1LQ9NR48 2969 aaKnown RBP11.75□□□□□ -0.53
VAT1-201ENST00000355653 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
VAT1-201ENST00000355653 CFAP161Q6P656 301 aa11.75□□□□□ -0.53
VAT1-201ENST00000355653 RELNP78509 3460 aa11.75□□□□□ -0.53
VAT1-201ENST00000355653 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
VAT1-201ENST00000355653 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
VAT1-201ENST00000355653 MRPL16Q9NX20 251 aaKnown RBP11.74□□□□□ -0.53
VAT1-201ENST00000355653 ABCA4P78363 2273 aa11.74□□□□□ -0.53
VAT1-201ENST00000355653 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
VAT1-201ENST00000355653 LY6HO94772 140 aa11.74□□□□□ -0.53
VAT1-201ENST00000355653 NPBQ8NG41 125 aa11.74□□□□□ -0.53
VAT1-201ENST00000355653 J3KRW8 73 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 SPRY2O43597 315 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 IGF2-ASQ6U949 168 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 H7C1H1 209 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
VAT1-201ENST00000355653 AGPAT4-IT1Q9H0P7 198 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 F8VRH5 84 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 MORN3Q6PF18 240 aaPredicted RBP11.73□□□□□ -0.53
VAT1-201ENST00000355653 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 SCGB3A1Q96QR1 104 aa11.73□□□□□ -0.53
VAT1-201ENST00000355653 ZNF292O60281 2723 aa11.72□□□□□ -0.53
VAT1-201ENST00000355653 A6NJY4 79 aa11.72□□□□□ -0.53
VAT1-201ENST00000355653 H3BVH4 76 aa11.72□□□□□ -0.53
VAT1-201ENST00000355653 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
VAT1-201ENST00000355653 TMEM78Q5T7P6 136 aa11.72□□□□□ -0.53
VAT1-201ENST00000355653 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
VAT1-201ENST00000355653 RAXQ9Y2V3 346 aa11.72□□□□□ -0.53
VAT1-201ENST00000355653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.71□□□□□ -0.53
VAT1-201ENST00000355653 SCGB1D4Q6XE38 83 aa11.71□□□□□ -0.53
VAT1-201ENST00000355653 LGALS1P09382 135 aaKnown RBP11.71□□□□□ -0.54
VAT1-201ENST00000355653 PSMB2P49721 201 aa11.71□□□□□ -0.54
VAT1-201ENST00000355653 VKORC1Q9BQB6 163 aa11.71□□□□□ -0.54
VAT1-201ENST00000355653 MED13LQ71F56 2210 aa11.7□□□□□ -0.54
VAT1-201ENST00000355653 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms