RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 YAE1D1Q9NRH1 226 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 FABP5P3A8MUU1 101 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 IGLV2-23P01705 113 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
PKP3-201ENST00000331563 TRBV6-1A0A0K0K1D8 114 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 CD40P25942 277 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 TMEM30BQ3MIR4 351 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 VCX2Q9H322 139 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 THBDP07204 575 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 ID1P41134 155 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 MAPKAPK5-AS1Q8N8E1 139 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 MSRB2Q9Y3D2 182 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 CCDC179H3BU77 68 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 GLRXP35754 106 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 CCL8P80075 99 aa14.22□□□□□ -0.13
PKP3-201ENST00000331563 SIGLEC15Q6ZMC9 328 aa14.21□□□□□ -0.13
PKP3-201ENST00000331563 LINC00574Q9H8X3 128 aa14.21□□□□□ -0.13
PKP3-201ENST00000331563 SHISA9B4DS77 424 aa14.21□□□□□ -0.14
PKP3-201ENST00000331563 SFTA2Q6UW10 78 aa14.21□□□□□ -0.14
PKP3-201ENST00000331563 PPDPFLQ8WWR9 84 aa14.21□□□□□ -0.14
PKP3-201ENST00000331563 TMEM158Q8WZ71 300 aa14.21□□□□□ -0.14
PKP3-201ENST00000331563 ZMAT4Q9H898 229 aa14.21□□□□□ -0.14
PKP3-201ENST00000331563 HRNRQ86YZ3 2850 aaPredicted RBP14.2□□□□□ -0.14
PKP3-201ENST00000331563 PKD1L2Q7Z442 2459 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 A0A087WX48 190 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 TAL2Q16559 108 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 GAS8-AS1O95177 125 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 SRD5A1P18405 259 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 CITED1Q99966 193 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 AAMDCQ9H7C9 122 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 MSRB1Q9NZV6 116 aa14.2□□□□□ -0.14
PKP3-201ENST00000331563 NDUFV3P56181 108 aaKnown RBP14.19□□□□□ -0.14
PKP3-201ENST00000331563 BSPH1Q075Z2 132 aa14.19□□□□□ -0.14
PKP3-201ENST00000331563 MRPL35Q9NZE8 188 aaKnown RBP14.19□□□□□ -0.14
PKP3-201ENST00000331563 MED13LQ71F56 2210 aa14.19□□□□□ -0.14
PKP3-201ENST00000331563 RHODO00212 210 aa14.19□□□□□ -0.14
PKP3-201ENST00000331563 ATP5LO75964 103 aa14.19□□□□□ -0.14
PKP3-201ENST00000331563 CARD19Q96LW7 228 aa14.19□□□□□ -0.14
PKP3-201ENST00000331563 NCBP2LA6PVI3 153 aaKnown RBP14.19□□□□□ -0.14
PKP3-201ENST00000331563 DLX4Q92988 240 aaPredicted RBP14.19□□□□□ -0.14
PKP3-201ENST00000331563 HIVEP3Q5T1R4 2406 aa14.18□□□□□ -0.14
PKP3-201ENST00000331563 NDUFA3O95167 84 aa14.18□□□□□ -0.14
PKP3-201ENST00000331563 RPEQ96AT9 228 aa14.18□□□□□ -0.14
PKP3-201ENST00000331563 TRBV20-1A0A075B6N2 111 aa14.18□□□□□ -0.14
PKP3-201ENST00000331563 PTH2Q96A98 100 aa14.18□□□□□ -0.14
PKP3-201ENST00000331563 NXT2Q9NPJ8 142 aaKnown RBP14.18□□□□□ -0.14
PKP3-201ENST00000331563 TNFRSF6BO95407 300 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 IGHV1-46P01743 117 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 CNTFRP26992 372 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 LOC107984156A0A0G2JMH3 177 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 ORM1P02763 201 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 EGR2P11161 476 aaPredicted RBP14.17□□□□□ -0.14
PKP3-201ENST00000331563 GATA1P15976 413 aaPredicted RBP14.17□□□□□ -0.14
PKP3-201ENST00000331563 PRTN3P24158 256 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 PLGLAQ15195 96 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 ARL17AQ8IVW1 177 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 SHANK2-AS3Q9BTD1 123 aa14.17□□□□□ -0.14
PKP3-201ENST00000331563 RAI1Q7Z5J4 1906 aaPredicted RBP14.17□□□□□ -0.14
PKP3-201ENST00000331563 IGKV2-40A0A087WW87 121 aaPredicted RBP14.16□□□□□ -0.14
PKP3-201ENST00000331563 IGKV2D-40P01614 121 aaPredicted RBP14.16□□□□□ -0.14
PKP3-201ENST00000331563 GRNP28799 593 aaKnown RBP14.16□□□□□ -0.14
PKP3-201ENST00000331563 TMEM200BQ69YZ2 307 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 TEN1Q86WV5 123 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 MYOZ3Q8TDC0 251 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 ACACBO00763 2458 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 IGLV3-9A0A075B6K5 115 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 TMEM262E9PQX1 116 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 HOXA3O43365 443 aaPredicted RBP14.16□□□□□ -0.14
PKP3-201ENST00000331563 IL4P05112 153 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 ZNF688P0C7X2 276 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 KIR2DL4Q99706 377 aa14.16□□□□□ -0.14
PKP3-201ENST00000331563 PSMB2P49721 201 aa14.15□□□□□ -0.14
PKP3-201ENST00000331563 GAGE2BQ13066 116 aa14.15□□□□□ -0.14
PKP3-201ENST00000331563 GAGE2EQ4V326 116 aa14.15□□□□□ -0.14
PKP3-201ENST00000331563 LYPD1Q8N2G4 141 aa14.15□□□□□ -0.14
PKP3-201ENST00000331563 Q8TAT8 98 aa14.15□□□□□ -0.14
PKP3-201ENST00000331563 GAGE2DQ9UEU5 116 aa14.15□□□□□ -0.14
PKP3-201ENST00000331563 CENPVL3A0A0U1RRI6 287 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 MORN3Q6PF18 240 aaPredicted RBP14.14□□□□□ -0.15
PKP3-201ENST00000331563 VPREB3Q9UKI3 123 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 VPS13CQ709C8 3753 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 CFAP46Q8IYW2 2715 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 IGKV1-17P01599 117 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 HLA-DRB4P13762 266 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 GATA4P43694 442 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 MRGPRG-AS1Q2M3A8 158 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 HLA-DRB4X5D2U9 266 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 ADIPOQQ15848 244 aa14.14□□□□□ -0.15
PKP3-201ENST00000331563 CACNA1AO00555 2505 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 CDSNQ15517 529 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 TTC32Q5I0X7 151 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 LINC01560Q8TB33 94 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 RAB1BQ9H0U4 201 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 H3BRN7 92 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 IFITM1P13164 125 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 S4R3C0 116 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 ZFYVE26Q68DK2 2539 aa14.13□□□□□ -0.15
PKP3-201ENST00000331563 RNF125Q96EQ8 232 aa14.12□□□□□ -0.15
PKP3-201ENST00000331563 SCGB2A1O75556 95 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms