RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 FAM181BA6NEQ2 426 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 Q8N2B8 174 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 MYOZ3Q8TDC0 251 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 NRN1Q9NPD7 142 aa12.01□□□□□ -0.49
PGBD2-201ENST00000329291 ANK3Q12955 4377 aaKnown RBP12□□□□□ -0.49
PGBD2-201ENST00000329291 K7EMT4 169 aa12□□□□□ -0.49
PGBD2-201ENST00000329291 ZNF324O75467 553 aaPredicted RBP12□□□□□ -0.49
PGBD2-201ENST00000329291 IGLC6P0CF74 106 aa12□□□□□ -0.49
PGBD2-201ENST00000329291 AMTP48728 403 aa12□□□□□ -0.49
PGBD2-201ENST00000329291 PRR9Q5T870 116 aa12□□□□□ -0.49
PGBD2-201ENST00000329291 Q6AWC8 147 aa12□□□□□ -0.49
PGBD2-201ENST00000329291 NIT1Q86X76 327 aa12□□□□□ -0.49
PGBD2-201ENST00000329291 IGKV3D-20A0A0C4DH25 116 aa11.99□□□□□ -0.49
PGBD2-201ENST00000329291 F6UB75 175 aa11.99□□□□□ -0.49
PGBD2-201ENST00000329291 GATD1Q8NB37 220 aa11.99□□□□□ -0.49
PGBD2-201ENST00000329291 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
PGBD2-201ENST00000329291 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
PGBD2-201ENST00000329291 NAGKQ9UJ70 344 aa11.99□□□□□ -0.49
PGBD2-201ENST00000329291 NTF3P20783 257 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 SRSF2Q01130 221 aaKnown RBP11.98□□□□□ -0.49
PGBD2-201ENST00000329291 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 HIST2H2BDQ6DRA6 164 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 MSRB1Q9NZV6 116 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 A0A087WW49 117 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
PGBD2-201ENST00000329291 PPP1R14DQ9NXH3 145 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 CLEC5AQ9NY25 188 aa11.98□□□□□ -0.49
PGBD2-201ENST00000329291 A0A1B0GW15 77 aa11.97□□□□□ -0.49
PGBD2-201ENST00000329291 DNAJC9-AS1A6NH13 148 aa11.97□□□□□ -0.49
PGBD2-201ENST00000329291 LGALS1P09382 135 aaKnown RBP11.97□□□□□ -0.49
PGBD2-201ENST00000329291 CTRLP40313 264 aa11.97□□□□□ -0.49
PGBD2-201ENST00000329291 SYNJ2BPP57105 145 aa11.97□□□□□ -0.49
PGBD2-201ENST00000329291 RPS20P60866 119 aaKnown RBP11.97□□□□□ -0.49
PGBD2-201ENST00000329291 SCGB2A2Q13296 93 aa11.97□□□□□ -0.49
PGBD2-201ENST00000329291 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
PGBD2-201ENST00000329291 J3KRW8 73 aa11.96□□□□□ -0.49
PGBD2-201ENST00000329291 TDRG1Q3Y452 100 aa11.96□□□□□ -0.49
PGBD2-201ENST00000329291 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
PGBD2-201ENST00000329291 RNF152Q8N8N0 203 aa11.96□□□□□ -0.49
PGBD2-201ENST00000329291 UBE2E2Q96LR5 201 aa11.96□□□□□ -0.49
PGBD2-201ENST00000329291 UFC1Q9Y3C8 167 aa11.96□□□□□ -0.49
PGBD2-201ENST00000329291 PMCHL1Q16048 86 aa11.96□□□□□ -0.5
PGBD2-201ENST00000329291 Q8N976 141 aa11.96□□□□□ -0.5
PGBD2-201ENST00000329291 DCANP1Q8TF63 244 aa11.96□□□□□ -0.5
PGBD2-201ENST00000329291 BORCS7Q96B45 105 aa11.96□□□□□ -0.5
PGBD2-201ENST00000329291 KRTDAPP60985 99 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 TWIST1Q15672 202 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 TCTEX1D4Q5JR98 221 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 AMN1Q8IY45 258 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 ZFAND2AQ8N6M9 145 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 HECTD1Q9ULT8 2610 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 OVOL1O14753 267 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 HIST1H1AQ02539 215 aaPredicted RBP11.95□□□□□ -0.5
PGBD2-201ENST00000329291 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 LINC00477Q96M19 166 aa11.95□□□□□ -0.5
PGBD2-201ENST00000329291 FASNP49327 2511 aaKnown RBP11.94□□□□□ -0.5
PGBD2-201ENST00000329291 HSBP1O75506 76 aa11.94□□□□□ -0.5
PGBD2-201ENST00000329291 HOXD3P31249 432 aaPredicted RBP11.94□□□□□ -0.5
PGBD2-201ENST00000329291 PKIAP61925 76 aa11.94□□□□□ -0.5
PGBD2-201ENST00000329291 FAM104BQ5XKR9 115 aa11.94□□□□□ -0.5
PGBD2-201ENST00000329291 KLHDC1Q8N7A1 406 aa11.94□□□□□ -0.5
PGBD2-201ENST00000329291 OR10J6PQ8NGY7 276 aa11.94□□□□□ -0.5
PGBD2-201ENST00000329291 CSN3P07498 182 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 OR8A1Q8NGG7 326 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 C3orf79P0CE67 100 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 TFPI2P48307 235 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 MS4A6AQ9H2W1 248 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 ESM1Q9NQ30 184 aa11.93□□□□□ -0.5
PGBD2-201ENST00000329291 M0R2Z0 102 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
PGBD2-201ENST00000329291 EBLN2Q6P2I7 272 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 ADAMTSL5Q6ZMM2 481 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 Q6ZSV7 163 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 D6R8Y8 96 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 LINC00614P0C842 121 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 U3KQK5 164 aa11.92□□□□□ -0.5
PGBD2-201ENST00000329291 SMKR1H3BMG3 65 aa11.91□□□□□ -0.5
PGBD2-201ENST00000329291 SLURP1P55000 103 aa11.91□□□□□ -0.5
PGBD2-201ENST00000329291 LINC00173Q6ZV60 143 aa11.91□□□□□ -0.5
PGBD2-201ENST00000329291 WFDC12Q8WWY7 111 aa11.91□□□□□ -0.5
PGBD2-201ENST00000329291 DUX3Q96PT4 197 aa11.91□□□□□ -0.5
PGBD2-201ENST00000329291 MTORP42345 2549 aa11.91□□□□□ -0.5
PGBD2-201ENST00000329291 LGALS9O00182 355 aa11.9□□□□□ -0.5
PGBD2-201ENST00000329291 GAS8-AS1O95177 125 aa11.9□□□□□ -0.5
PGBD2-201ENST00000329291 TEX43Q6ZNM6 134 aa11.9□□□□□ -0.5
PGBD2-201ENST00000329291 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
PGBD2-201ENST00000329291 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
PGBD2-201ENST00000329291 C2orf70A6NJV1 201 aa11.9□□□□□ -0.5
PGBD2-201ENST00000329291 SPRY2O43597 315 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms