RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 K7EIM0 57 aa13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 GNG7O60262 68 aa13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 CHTOPQ9Y3Y2 248 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 USP9YO00507 2555 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 NBPF19A0A087WUL8 3843 aa13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 IGKV2-40A0A087WW87 121 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 FBLL1A6NHQ2 334 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 IGKV2D-40P01614 121 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-201ENST00000316097 CLEC2AQ6UVW9 174 aa13.33□□□□□ -0.28
SCAMP4-201ENST00000316097 PTPN13Q12923 2485 aa13.33□□□□□ -0.28
SCAMP4-201ENST00000316097 TENM4Q6N022 2769 aa13.33□□□□□ -0.28
SCAMP4-201ENST00000316097 CNIH1O95406 144 aa13.33□□□□□ -0.28
SCAMP4-201ENST00000316097 CEACAM3P40198 252 aa13.33□□□□□ -0.28
SCAMP4-201ENST00000316097 CHAC1Q9BUX1 264 aa13.33□□□□□ -0.28
SCAMP4-201ENST00000316097 EGR2P11161 476 aaPredicted RBP13.32□□□□□ -0.28
SCAMP4-201ENST00000316097 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
SCAMP4-201ENST00000316097 C10orf105Q8TEF2 133 aa13.32□□□□□ -0.28
SCAMP4-201ENST00000316097 TMEM190Q8WZ59 177 aa13.32□□□□□ -0.28
SCAMP4-201ENST00000316097 C1orf122Q6ZSJ8 110 aa13.32□□□□□ -0.28
SCAMP4-201ENST00000316097 GAS8-AS1O95177 125 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 LEPP41159 167 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 ODF1Q14990 250 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 Q8TAT8 98 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 PIMREGQ9BSJ6 248 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 MAP1LC3AQ9H492 121 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 MSRB1Q9NZV6 116 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 K7EMI3 77 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 PRSS1P07477 247 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 COX6B1P14854 86 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
SCAMP4-201ENST00000316097 VGLL1Q99990 258 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 HHLA3Q9XRX5 114 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 NCBP2LA6PVI3 153 aaKnown RBP13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 NPIPB5A8MRT5 1133 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 ZNF80P51504 273 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 KLF17Q5JT82 389 aaPredicted RBP13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 ZNF562Q6V9R5 426 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 GTSCR1Q86UQ5 136 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 AJUBAQ96IF1 538 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 HIGD1BQ9P298 99 aa13.3□□□□□ -0.28
SCAMP4-201ENST00000316097 AZU1P20160 251 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 SAA4P35542 130 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 MAPK1IP1LQ8NDC0 245 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 PIFOQ8TCI5 191 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 PRR25Q96S07 402 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 EVI2AP22794 236 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 PDE6HQ13956 83 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 ZANQ9Y493 2812 aa13.29□□□□□ -0.28
SCAMP4-201ENST00000316097 TRBV25-1A0A075B6N4 114 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 NBR2O15453 112 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 IGKCP01834 107 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 PHLDA1Q8WV24 401 aaPredicted RBP13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 RNF185Q96GF1 192 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 SMAGPQ0VAQ4 97 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 BRD3OSQ6XYD6 125 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 FOXC2Q99958 501 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 ANKRD17O75179 2603 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-201ENST00000316097 CENPVL3A0A0U1RRI6 287 aa13.27□□□□□ -0.28
SCAMP4-201ENST00000316097 IGLC6P0CF74 106 aa13.27□□□□□ -0.28
SCAMP4-201ENST00000316097 FCER1GP30273 86 aa13.27□□□□□ -0.28
SCAMP4-201ENST00000316097 HIST2H2BCQ6DN03 193 aa13.27□□□□□ -0.28
SCAMP4-201ENST00000316097 ZNF207O43670 478 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-201ENST00000316097 UBE2E1P51965 193 aa13.27□□□□□ -0.29
SCAMP4-201ENST00000316097 ZC2HC1BQ5TFG8 222 aa13.27□□□□□ -0.29
SCAMP4-201ENST00000316097 IGFL4Q6B9Z1 124 aa13.27□□□□□ -0.29
SCAMP4-201ENST00000316097 CEND1Q8N111 149 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 TNFRSF6BO95407 300 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 ORM1P02763 201 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 GATA1P15976 413 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 SIGMAR1Q99720 223 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 TSSC4Q9Y5U2 329 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 BMI1P35226 326 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 WFDC2Q14508 124 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 TMEM158Q8WZ71 300 aa13.26□□□□□ -0.29
SCAMP4-201ENST00000316097 HLA-DMBP28068 263 aa13.25□□□□□ -0.29
SCAMP4-201ENST00000316097 NXT2Q9NPJ8 142 aaKnown RBP13.25□□□□□ -0.29
SCAMP4-201ENST00000316097 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
SCAMP4-201ENST00000316097 DPM2O94777 84 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 PSMG4Q5JS54 123 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 COX8CQ7Z4L0 72 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 RNF5Q99942 180 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 TM2D2Q9BX73 214 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 NPFFO15130 113 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 PPIFP30405 207 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 NDPQ00604 133 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 MINOS1Q5TGZ0 78 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 CCDC144NLQ6NUI1 221 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 S100A7AQ86SG5 101 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 NPBQ8NG41 125 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 SRSF8Q9BRL6 282 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 MINOS1-NBL1R4GNA1 71 aa13.24□□□□□ -0.29
SCAMP4-201ENST00000316097 TRAV40A0A0B4J280 105 aa13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 E9PLD3 99 aa13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 SPANXB1Q9NS25 103 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-201ENST00000316097 GAGE12HA6NDE8 117 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms