RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 TEX36Q5VZQ5 186 aa14.04□□□□□ -0.16
RETREG1-201ENST00000306320 FOXI2Q6ZQN5 318 aa14.04□□□□□ -0.16
RETREG1-201ENST00000306320 CACNA1AO00555 2505 aa14.04□□□□□ -0.16
RETREG1-201ENST00000306320 SRSF9Q13242 221 aaKnown RBP eCLIP14.03□□□□□ -0.16
RETREG1-201ENST00000306320 ZNF562Q6V9R5 426 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 RPEQ96AT9 228 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 PGPEP1Q9NXJ5 209 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 DPM2O94777 84 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 GATA3P23771 443 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 ERCC8Q13216 396 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 MT-ATP8P03928 68 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 ODF1Q14990 250 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 NUP37Q8NFH4 326 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 ZNF502Q8TBZ5 544 aa14.03□□□□□ -0.16
RETREG1-201ENST00000306320 CRYBG3Q68DQ2 2970 aa14.02□□□□□ -0.16
RETREG1-201ENST00000306320 CD3EP07766 207 aa14.02□□□□□ -0.16
RETREG1-201ENST00000306320 MYOZ3Q8TDC0 251 aa14.02□□□□□ -0.17
RETREG1-201ENST00000306320 TNFRSF6BO95407 300 aa14.02□□□□□ -0.17
RETREG1-201ENST00000306320 IGLV2-23P01705 113 aa14.02□□□□□ -0.17
RETREG1-201ENST00000306320 IGHV1-8P0DP01 117 aa14.02□□□□□ -0.17
RETREG1-201ENST00000306320 RNF125Q96EQ8 232 aa14.02□□□□□ -0.17
RETREG1-201ENST00000306320 VKORC1Q9BQB6 163 aa14.02□□□□□ -0.17
RETREG1-201ENST00000306320 ZNF80P51504 273 aaPredicted RBP14.01□□□□□ -0.17
RETREG1-201ENST00000306320 WI2-2373I1.2A0A1W2PRP0 233 aa14.01□□□□□ -0.17
RETREG1-201ENST00000306320 NCBP2LA6PVI3 153 aaKnown RBP14.01□□□□□ -0.17
RETREG1-201ENST00000306320 VSTM5A8MXK1 200 aa14.01□□□□□ -0.17
RETREG1-201ENST00000306320 SIGLEC15Q6ZMC9 328 aa14.01□□□□□ -0.17
RETREG1-201ENST00000306320 F8W1H4 67 aa14□□□□□ -0.17
RETREG1-201ENST00000306320 PPP1R27Q86WC6 154 aa14□□□□□ -0.17
RETREG1-201ENST00000306320 CUBNO60494 3623 aa14□□□□□ -0.17
RETREG1-201ENST00000306320 IGKV1-17P01599 117 aa14□□□□□ -0.17
RETREG1-201ENST00000306320 SCGB1C2P0DMR2 95 aa14□□□□□ -0.17
RETREG1-201ENST00000306320 SIVA1O15304 175 aa13.99□□□□□ -0.17
RETREG1-201ENST00000306320 IGF2-ASQ6U949 168 aa13.99□□□□□ -0.17
RETREG1-201ENST00000306320 LINC01549A6NIU2 74 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 LINC01548A6NM66 108 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 HLA-DRB4P13762 266 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 LY6DQ14210 128 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 HLA-DRB4X5D2U9 266 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 MC5RP33032 325 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 HHLA3Q9XRX5 114 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 C1orf122Q6ZSJ8 110 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 RNF182Q8N6D2 247 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 RNF183Q96D59 192 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 MRAP2Q96G30 205 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 SIGLEC9Q9Y336 463 aa13.98□□□□□ -0.17
RETREG1-201ENST00000306320 CSMD2Q7Z408 3487 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 UTP20O75691 2785 aaKnown RBP13.97□□□□□ -0.17
RETREG1-201ENST00000306320 POLQO75417 2590 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 OR11H12B2RN74 326 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 TRGV3P03979 118 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 ZFP2Q6ZN57 461 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 OR11H1Q8NG94 326 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 OR11H2Q8NH07 326 aa13.97□□□□□ -0.17
RETREG1-201ENST00000306320 PRTN3P24158 256 aa13.96□□□□□ -0.17
RETREG1-201ENST00000306320 E9PLD3 99 aa13.96□□□□□ -0.17
RETREG1-201ENST00000306320 CSPG4Q6UVK1 2322 aa13.96□□□□□ -0.17
RETREG1-201ENST00000306320 NBL1P41271 181 aa13.96□□□□□ -0.18
RETREG1-201ENST00000306320 TMEM155Q4W5P6 130 aa13.96□□□□□ -0.18
RETREG1-201ENST00000306320 Q6AWC8 147 aa13.96□□□□□ -0.18
RETREG1-201ENST00000306320 HOXA3O43365 443 aaPredicted RBP13.95□□□□□ -0.18
RETREG1-201ENST00000306320 ANAPC13Q9BS18 74 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 B5MCH6 92 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 ZNF672Q499Z4 452 aaPredicted RBP13.95□□□□□ -0.18
RETREG1-201ENST00000306320 C8orf86Q6ZUL3 223 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 KIR2DL4Q99706 377 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 SHANK2-AS3Q9BTD1 123 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 FAM208BQ5VWN6 2430 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 A0A1B0GW15 77 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 K7ENP7 123 aa13.95□□□□□ -0.18
RETREG1-201ENST00000306320 SPANXN1Q5VSR9 72 aa13.94□□□□□ -0.18
RETREG1-201ENST00000306320 DPF1Q92782 380 aa13.94□□□□□ -0.18
RETREG1-201ENST00000306320 RRN3P1Q2M238 152 aa13.94□□□□□ -0.18
RETREG1-201ENST00000306320 Q6ZQT7 251 aa13.94□□□□□ -0.18
RETREG1-201ENST00000306320 ZNF491Q8N8L2 437 aa13.94□□□□□ -0.18
RETREG1-201ENST00000306320 PHLDA1Q8WV24 401 aaPredicted RBP13.94□□□□□ -0.18
RETREG1-201ENST00000306320 TRBV20-1A0A075B6N2 111 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 PRSS29PA6NIE9 313 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 KLHL30-AS1Q8NEE0 82 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 PRR25Q96S07 402 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 CREBBPQ92793 2442 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 OVOL3O00110 214 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 TIMM23O14925 209 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 DTX2Q86UW9 622 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 IGKV3-7A0A075B6H7 116 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 IGHV1-3A0A0C4DH29 117 aa13.93□□□□□ -0.18
RETREG1-201ENST00000306320 M0R381 172 aa13.92□□□□□ -0.18
RETREG1-201ENST00000306320 XGP55808 180 aa13.92□□□□□ -0.18
RETREG1-201ENST00000306320 CRYGCP07315 174 aa13.92□□□□□ -0.18
RETREG1-201ENST00000306320 RPL7P18124 248 aaKnown RBP13.92□□□□□ -0.18
RETREG1-201ENST00000306320 FOXI1Q12951 378 aa13.92□□□□□ -0.18
RETREG1-201ENST00000306320 BEX4Q9NWD9 120 aaPredicted RBP13.92□□□□□ -0.18
RETREG1-201ENST00000306320 NOTCH3Q9UM47 2321 aa13.91□□□□□ -0.18
RETREG1-201ENST00000306320 ZNF815PA8K554 130 aa13.91□□□□□ -0.18
RETREG1-201ENST00000306320 MGPP08493 103 aa13.91□□□□□ -0.18
RETREG1-201ENST00000306320 DLX6P56179 175 aa13.91□□□□□ -0.18
RETREG1-201ENST00000306320 ITPR1Q14643 2758 aa13.91□□□□□ -0.18
RETREG1-201ENST00000306320 ZNF493Q6ZR52 646 aa13.91□□□□□ -0.18
RETREG1-201ENST00000306320 IL17RELQ6ZVW7 336 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms