RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 HAX1O00165 279 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 BLCAPP62952 87 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 FA2HQ7L5A8 372 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 MSMBP08118 114 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 TEX15Q9BXT5 2789 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 LOXL1Q08397 574 aaPredicted RBP16.93■□□□□ 0.3
TPM4-201ENST00000300933 RNF182Q8N6D2 247 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 MOB4Q9Y3A3 225 aa16.93■□□□□ 0.3
TPM4-201ENST00000300933 SEC11AP67812 179 aa16.92■□□□□ 0.3
TPM4-201ENST00000300933 SRSF1Q07955 248 aaKnown RBP eCLIP16.92■□□□□ 0.32e-6■□□□□ 8.5
TPM4-201ENST00000300933 TRAV41A0A0B4J266 112 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 A0A1B0GUT8 65 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 RPL7P18124 248 aaKnown RBP16.91■□□□□ 0.3
TPM4-201ENST00000300933 IFI27P40305 119 aaPredicted RBP16.91■□□□□ 0.3
TPM4-201ENST00000300933 GTF2H5Q6ZYL4 71 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 VGLL1Q99990 258 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 ZFAND3Q9H8U3 227 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 CSN1S1P47710 185 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 UFSP1Q6NVU6 142 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 TMEM75Q8N9X5 138 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 OR10AG1Q8NH19 301 aa16.91■□□□□ 0.3
TPM4-201ENST00000300933 ZNF469Q96JG9 3925 aaPredicted RBP16.9■□□□□ 0.3
TPM4-201ENST00000300933 K7EQM0 130 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 TRBV12-3P01733 135 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 IGHG4P01861 327 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 FGF6P10767 208 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 C9orf118A6NHY6 69 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 NPIPB6E9PJ23 425 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 LYPD1Q8N2G4 141 aa16.9■□□□□ 0.3
TPM4-201ENST00000300933 CLPSL1A2RUU4 121 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 IGHV3-11P01762 117 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 KIR3DS1Q14943 382 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 PRSS57Q6UWY2 283 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 SERTM2A0A1B0GWG4 89 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 PRAC2D3DTV9 90 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 NDUFS8O00217 210 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 TRGV3P03979 118 aa16.89■□□□□ 0.29
TPM4-201ENST00000300933 ERCC8Q13216 396 aa16.88■□□□□ 0.29
TPM4-201ENST00000300933 A0A0G2JLM5 398 aa16.88■□□□□ 0.29
TPM4-201ENST00000300933 A6NDN8 102 aa16.88■□□□□ 0.29
TPM4-201ENST00000300933 ATP5G2Q06055 141 aa16.88■□□□□ 0.29
TPM4-201ENST00000300933 EEF1AKMT3Q96AZ1 226 aa16.88■□□□□ 0.29
TPM4-201ENST00000300933 BUB3O43684 328 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 KRTAP10-9P60411 292 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 TM4SF20Q53R12 229 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 S100A7AQ86SG5 101 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 KLK15Q9H2R5 256 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 G3V4G9 280 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 SCGB2A1O75556 95 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 GOSR1O95249 250 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 CACNG7P62955 275 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 PDE6HQ13956 83 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 ZNF843Q8N446 348 aa16.87■□□□□ 0.29
TPM4-201ENST00000300933 A0A096LNJ9 63 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 H3BRM9 83 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 RIGQ13278 110 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 TMEM95Q3KNT9 176 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 OR2K2Q8NGT1 345 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 SPOCK3Q9BQ16 436 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 CREBBPQ92793 2442 aa16.86■□□□□ 0.29
TPM4-201ENST00000300933 K7EP34 96 aa16.85■□□□□ 0.29
TPM4-201ENST00000300933 NMUP48645 174 aa16.85■□□□□ 0.29
TPM4-201ENST00000300933 WFDC3Q8IUB2 231 aa16.85■□□□□ 0.29
TPM4-201ENST00000300933 CCDC168Q8NDH2 2452 aa16.85■□□□□ 0.29
TPM4-201ENST00000300933 D6R8Y8 96 aa16.84■□□□□ 0.29
TPM4-201ENST00000300933 ZNF80P51504 273 aaPredicted RBP16.84■□□□□ 0.29
TPM4-201ENST00000300933 B4DSR2 109 aa16.83■□□□□ 0.29
TPM4-201ENST00000300933 UNQ9165/PRO28630Q6UXU0 137 aa16.83■□□□□ 0.29
TPM4-201ENST00000300933 PCP2Q8IVA1 136 aa16.83■□□□□ 0.29
TPM4-201ENST00000300933 SIGLEC8Q9NYZ4 499 aa16.83■□□□□ 0.29
TPM4-201ENST00000300933 SONP18583 2426 aaKnown RBP16.83■□□□□ 0.29
TPM4-201ENST00000300933 CT45A10P0DMU9 189 aa16.83■□□□□ 0.28
TPM4-201ENST00000300933 OR1N2Q8NGR9 330 aa16.83■□□□□ 0.28
TPM4-201ENST00000300933 APCP25054 2843 aa16.83■□□□□ 0.28
TPM4-201ENST00000300933 BOD1L2Q8IYS8 172 aa16.83■□□□□ 0.28
TPM4-201ENST00000300933 TRBV7-1A0A0A6YYK4 115 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 SMAD7O15105 426 aaKnown RBP16.82■□□□□ 0.28
TPM4-201ENST00000300933 SPCS1Q9Y6A9 102 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 CHD6Q8TD26 2715 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 TMEM213A2RRL7 107 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 SH2D1AO60880 128 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 PF4V1P10720 104 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 COX6B1P14854 86 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 PRR25Q96S07 402 aa16.82■□□□□ 0.28
TPM4-201ENST00000300933 TGFAP01135 160 aa16.81■□□□□ 0.28
TPM4-201ENST00000300933 C19orf54Q5BKX5 351 aa16.81■□□□□ 0.28
TPM4-201ENST00000300933 AMN1Q8IY45 258 aa16.81■□□□□ 0.28
TPM4-201ENST00000300933 A6NDX4 124 aa16.81■□□□□ 0.28
TPM4-201ENST00000300933 IGKV3-7A0A075B6H7 116 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 TRBV6-1A0A0K0K1D8 114 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 ARL3P36405 182 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 HSD52Q0P140 79 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 C16orf54Q6UWD8 224 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 METTL26Q96S19 204 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 IGHV4-59P01825 116 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 ADAMTSL5Q6ZMM2 481 aa16.8■□□□□ 0.28
TPM4-201ENST00000300933 RNF223E7ERA6 249 aa16.79■□□□□ 0.28
TPM4-201ENST00000300933 PRELID3AQ96N28 172 aa16.79■□□□□ 0.28
TPM4-201ENST00000300933 MYO9AB2RTY4 2548 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms