RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SPRY2O43597 315 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 MRGPRG-AS1Q2M3A8 158 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 E9PLD3 99 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 ECSCRQ19T08 205 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 IL17RELQ6ZVW7 336 aa8.91□□□□□ -0.98
TRUB1-201ENST00000298746 TLN1Q9Y490 2541 aaKnown RBP8.91□□□□□ -0.98
TRUB1-201ENST00000298746 TRBV6-1A0A0K0K1D8 114 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 TRGV3P03979 118 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 LINC01549A6NIU2 74 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 ZNF815PA8K554 130 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 H7C2G1 150 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 Q8N8P6 123 aa8.9□□□□□ -0.98
TRUB1-201ENST00000298746 BDP1A6H8Y1 2624 aa8.9□□□□□ -0.99
TRUB1-201ENST00000298746 SCGB1A1P11684 91 aa8.9□□□□□ -0.99
TRUB1-201ENST00000298746 HOXB4P17483 251 aaPredicted RBP8.9□□□□□ -0.99
TRUB1-201ENST00000298746 EMP1P54849 157 aa8.9□□□□□ -0.99
TRUB1-201ENST00000298746 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.99
TRUB1-201ENST00000298746 SRSF1Q07955 248 aaKnown RBP eCLIP8.9□□□□□ -0.99
TRUB1-201ENST00000298746 KLRD1Q13241 179 aa8.9□□□□□ -0.99
TRUB1-201ENST00000298746 DYNAPQ8N1N2 210 aa8.9□□□□□ -0.99
TRUB1-201ENST00000298746 TMEM238LA0A1B0GVL6 79 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 A6NJY4 79 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 CEACAM4O75871 244 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 NUP37Q8NFH4 326 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 TM2D2Q9BX73 214 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 IGKV3-7A0A075B6H7 116 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 DPM3Q9P2X0 92 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 ZFHX2Q9C0A1 2572 aaPredicted RBP8.89□□□□□ -0.99
TRUB1-201ENST00000298746 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 CLEC3BP05452 202 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 CFHR4Q92496 578 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 PTH2Q96A98 100 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 RNF185Q96GF1 192 aa8.89□□□□□ -0.99
TRUB1-201ENST00000298746 PLNP26678 52 aa8.88□□□□□ -0.99
TRUB1-201ENST00000298746 GATD1Q8NB37 220 aa8.88□□□□□ -0.99
TRUB1-201ENST00000298746 LY6HO94772 140 aa8.88□□□□□ -0.99
TRUB1-201ENST00000298746 IGLV1-47P01700 117 aa8.88□□□□□ -0.99
TRUB1-201ENST00000298746 DLX4Q92988 240 aaPredicted RBP8.88□□□□□ -0.99
TRUB1-201ENST00000298746 MRAP2Q96G30 205 aa8.88□□□□□ -0.99
TRUB1-201ENST00000298746 H7C1H1 209 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 CRYGBP07316 175 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 HLA-DRB4P13762 266 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 CRYBA4P53673 196 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 DLX6P56179 175 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 C8orf31Q8N9H6 132 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 GLMPQ8WWB7 406 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 HLA-DRB4X5D2U9 266 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 OTOGLQ3ZCN5 2332 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 A0A087WX48 190 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 IGLC6P0CF74 106 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 CUL9Q8IWT3 2517 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 MYMXA0A1B0GTQ4 84 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 SHISA9B4DS77 424 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 OVOL3O00110 214 aa8.87□□□□□ -0.99
TRUB1-201ENST00000298746 A0A0G2JNJ9 132 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 Q1RN00 199 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 C5orf64Q2M2E5 130 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 Q9UFV3 132 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 ANKRD11Q6UB99 2663 aaPredicted RBP8.86□□□□□ -0.99
TRUB1-201ENST00000298746 SORL1Q92673 2214 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 F8VRH5 84 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 LYRM7Q5U5X0 104 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 PHLDA1Q8WV24 401 aaPredicted RBP8.86□□□□□ -0.99
TRUB1-201ENST00000298746 PRADC1Q9BSG0 188 aa8.86□□□□□ -0.99
TRUB1-201ENST00000298746 F5H697 171 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 SLC25A16P16260 332 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 TAL2Q16559 108 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 LINC01559Q495D7 138 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 PHLDA3Q9Y5J5 127 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 E7EQL1 145 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 CD3EP07766 207 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 FOXI1Q12951 378 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 C3orf36Q3SXR2 165 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 CLEC19AQ6UXS0 136 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 KLHL30-AS1Q8NEE0 82 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 FAM57AQ8TBR7 257 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
TRUB1-201ENST00000298746 SMG1Q96Q15 3661 aaKnown RBP8.85□□□□□ -0.99
TRUB1-201ENST00000298746 MRPS12O15235 138 aaKnown RBP8.84□□□□□ -0.99
TRUB1-201ENST00000298746 TMEM170BQ5T4T1 132 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 C8orf86Q6ZUL3 223 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
TRUB1-201ENST00000298746 C15orf32Q32M92 178 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 DOPEY2Q9Y3R5 2298 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 ZFP2Q6ZN57 461 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 FANCD2OSQ96PS1 177 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 KAAG1Q9UBP8 84 aa8.84□□□□□ -0.99
TRUB1-201ENST00000298746 PRTN3P24158 256 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 NDPQ00604 133 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 PAX8Q06710 450 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 IGFL2Q6UWQ7 119 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 DEFB123Q8N688 67 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 HERVK_113P61574 105 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms