RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 J3KRW8 73 aa12.6□□□□□ -0.39
HIF3A-203ENST00000291300 TFPI2P48307 235 aa12.6□□□□□ -0.39
HIF3A-203ENST00000291300 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
HIF3A-203ENST00000291300 DCANP1Q8TF63 244 aa12.6□□□□□ -0.39
HIF3A-203ENST00000291300 NDFIP1Q9BT67 221 aa12.6□□□□□ -0.39
HIF3A-203ENST00000291300 SETD2Q9BYW2 2564 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-203ENST00000291300 PCP4L1A6NKN8 68 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 HAX1O00165 279 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 Q0VG73 95 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 TEX29Q8N6K0 151 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 C11orf44Q8N8P7 122 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 ORM1P02763 201 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 BAGE3Q86Y29 109 aa12.59□□□□□ -0.39
HIF3A-203ENST00000291300 FABP5P3A8MUU1 101 aa12.58□□□□□ -0.4
HIF3A-203ENST00000291300 REC114Q7Z4M0 266 aa12.58□□□□□ -0.4
HIF3A-203ENST00000291300 IGKV3D-20A0A0C4DH25 116 aa12.58□□□□□ -0.4
HIF3A-203ENST00000291300 KLF5Q13887 457 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-203ENST00000291300 C18orf32Q8TCD1 76 aa12.58□□□□□ -0.4
HIF3A-203ENST00000291300 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-203ENST00000291300 MS4A6AQ9H2W1 248 aa12.58□□□□□ -0.4
HIF3A-203ENST00000291300 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
HIF3A-203ENST00000291300 SORL1Q92673 2214 aa12.57□□□□□ -0.4
HIF3A-203ENST00000291300 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
HIF3A-203ENST00000291300 BMI1P35226 326 aa12.57□□□□□ -0.4
HIF3A-203ENST00000291300 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-203ENST00000291300 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
HIF3A-203ENST00000291300 LGALS9O00182 355 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 CD33P20138 364 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 OR8A1Q8NGG7 326 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 WFDC12Q8WWY7 111 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
HIF3A-203ENST00000291300 LY6G6DO95868 133 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 OR10J3Q5JRS4 329 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 M0QZ24 198 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 AGRNO00468 2067 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 OVOL1O14753 267 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 ZNF688P0C7X2 276 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 LINC01559Q495D7 138 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 KLHL30-AS1Q8NEE0 82 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 OR10J6PQ8NGY7 276 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 TMEM18Q96B42 140 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
HIF3A-203ENST00000291300 HIVEP2P31629 2446 aa12.54□□□□□ -0.4
HIF3A-203ENST00000291300 ESDP10768 282 aa12.54□□□□□ -0.4
HIF3A-203ENST00000291300 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
HIF3A-203ENST00000291300 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
HIF3A-203ENST00000291300 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-203ENST00000291300 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 LINC01619G3V211 115 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 CD28P10747 220 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 RIGQ13278 110 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-203ENST00000291300 URB1-AS1Q96HZ7 61 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 CTRLP40313 264 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 LINC00477Q96M19 166 aa12.53□□□□□ -0.4
HIF3A-203ENST00000291300 K7EQG2 157 aa12.52□□□□□ -0.4
HIF3A-203ENST00000291300 RNASE1P07998 156 aaKnown RBP12.52□□□□□ -0.4
HIF3A-203ENST00000291300 SRSF2Q01130 221 aaKnown RBP12.52□□□□□ -0.4
HIF3A-203ENST00000291300 PSMG4Q5JS54 123 aa12.52□□□□□ -0.4
HIF3A-203ENST00000291300 Q6AWC8 147 aa12.52□□□□□ -0.4
HIF3A-203ENST00000291300 SPRY2O43597 315 aa12.52□□□□□ -0.41
HIF3A-203ENST00000291300 Q6ZWC4 215 aa12.52□□□□□ -0.41
HIF3A-203ENST00000291300 FAM19A2Q8N3H0 131 aa12.52□□□□□ -0.41
HIF3A-203ENST00000291300 GATD1Q8NB37 220 aa12.52□□□□□ -0.41
HIF3A-203ENST00000291300 LINC01006Q8NI28 216 aa12.52□□□□□ -0.41
HIF3A-203ENST00000291300 WNK1Q9H4A3 2382 aa12.51□□□□□ -0.41
HIF3A-203ENST00000291300 NTF3P20783 257 aa12.51□□□□□ -0.41
HIF3A-203ENST00000291300 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
HIF3A-203ENST00000291300 SETXQ7Z333 2677 aaKnown RBP12.51□□□□□ -0.41
HIF3A-203ENST00000291300 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 DPF1Q92782 380 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 RAX2Q96IS3 184 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 PMCHP20382 165 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 RNASE4P34096 147 aaKnown RBP12.5□□□□□ -0.41
HIF3A-203ENST00000291300 ID1P41134 155 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 JOSD1Q15040 202 aaPredicted RBP12.5□□□□□ -0.41
HIF3A-203ENST00000291300 KCNS1Q96KK3 526 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
HIF3A-203ENST00000291300 GPX1P07203 203 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 TWIST1Q15672 202 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 CITED2Q99967 270 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-203ENST00000291300 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 HILS1P60008 231 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
HIF3A-203ENST00000291300 SAMD10Q9BYL1 202 aa12.48□□□□□ -0.41
HIF3A-203ENST00000291300 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
HIF3A-203ENST00000291300 CSN3P07498 182 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms