RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 GAGE12IP0CL82 117 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 GAGE4Q13068 117 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 SFTA2Q6UW10 78 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 RNF185Q96GF1 192 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 TMEM178BH3BS89 294 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 NDUFA3O95167 84 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 ANXA2RQ3ZCQ2 193 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 KAAG1Q9UBP8 84 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 ZZEF1O43149 2961 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 CACNA1AO00555 2505 aa10.24□□□□□ -0.77
NUP54-201ENST00000264883 ARFGEF3Q5TH69 2177 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 RHODO00212 210 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 SRD5A1P18405 259 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 DLX6P56179 175 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 DIAPH2-AS1Q14236 149 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 MYOZ3Q8TDC0 251 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 CHD8Q9HCK8 2581 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 RP1L1Q8IWN7 2480 aaPredicted RBP10.23□□□□□ -0.77
NUP54-201ENST00000264883 A0A087WX48 190 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 CCDC179H3BU77 68 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 M0R3E3 92 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 PLNP26678 52 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 NDUFV3P56181 108 aaKnown RBP10.23□□□□□ -0.77
NUP54-201ENST00000264883 CCL8P80075 99 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 TMEM155Q4W5P6 130 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 KIR2DL4Q99706 377 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 TPSG1Q9NRR2 321 aa10.23□□□□□ -0.77
NUP54-201ENST00000264883 A8MWV9 139 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 APELAP0DMC3 54 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 LYRM7Q5U5X0 104 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 FAM57AQ8TBR7 257 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 RAX2Q96IS3 184 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 RASL11BQ9BPW5 248 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 SIGLEC9Q9Y336 463 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 ENSAO43768 121 aaKnown RBP10.22□□□□□ -0.77
NUP54-201ENST00000264883 IGHV1-8P0DP01 117 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 UBE2D3P61077 147 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 UBE2D2P62837 147 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 Q8N8P6 123 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 RNF5Q99942 180 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
NUP54-201ENST00000264883 FABP5P3A8MUU1 101 aa10.21□□□□□ -0.77
NUP54-201ENST00000264883 EGR2P11161 476 aaPredicted RBP10.21□□□□□ -0.77
NUP54-201ENST00000264883 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.77
NUP54-201ENST00000264883 FBXL15Q9H469 300 aa10.21□□□□□ -0.77
NUP54-201ENST00000264883 TRBV20-1A0A075B6N2 111 aa10.21□□□□□ -0.78
NUP54-201ENST00000264883 H3BVH4 76 aa10.21□□□□□ -0.78
NUP54-201ENST00000264883 IGLC6P0CF74 106 aa10.21□□□□□ -0.78
NUP54-201ENST00000264883 LOXP28300 417 aaPredicted RBP10.21□□□□□ -0.78
NUP54-201ENST00000264883 H3BRN7 92 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 BRI3O95415 125 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 CLEC3BP05452 202 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 LGALS1P09382 135 aaKnown RBP10.2□□□□□ -0.78
NUP54-201ENST00000264883 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
NUP54-201ENST00000264883 PDE6HQ13956 83 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 PPP1R27Q86WC6 154 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
NUP54-201ENST00000264883 TEX22C9J3V5 150 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 I3L2K1 104 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 FCN3O75636 299 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 SNCGO76070 127 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 UBE2D1P51668 147 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 PLGLAQ15195 96 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 TTC32Q5I0X7 151 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 AJUBAQ96IF1 538 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 TCL1BO95988 128 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 C1orf122Q6ZSJ8 110 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 ZGRF1Q86YA3 2104 aa10.19□□□□□ -0.78
NUP54-201ENST00000264883 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 IFITM1P13164 125 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 FAM27E3Q08E93 113 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 TMEM78Q5T7P6 136 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 AAMDCQ9H7C9 122 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 LAGE3Q14657 143 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 PRR30Q53SZ7 412 aaPredicted RBP10.18□□□□□ -0.78
NUP54-201ENST00000264883 COX8CQ7Z4L0 72 aa10.18□□□□□ -0.78
NUP54-201ENST00000264883 H7C1H1 209 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 HIF1ANQ9NWT6 349 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 SPTA1P02549 2419 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 PLXNB1O43157 2135 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 IGHV1-3A0A0C4DH29 117 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 F8VRH5 84 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 ARL3P36405 182 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 ASIPP42127 132 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
NUP54-201ENST00000264883 LYPD2Q6UXB3 125 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 RAB1BQ9H0U4 201 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 PRORYQ9H606 182 aa10.17□□□□□ -0.78
NUP54-201ENST00000264883 IGKV1-17P01599 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms