RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 V9GYV3 84 aa16.8■□□□□ 0.28
UFD1-201ENST00000263202 H3BMM0 161 aa16.8■□□□□ 0.28
UFD1-201ENST00000263202 WIPF1O43516 503 aa16.8■□□□□ 0.28
UFD1-201ENST00000263202 IGKV3-20P01619 116 aa16.8■□□□□ 0.28
UFD1-201ENST00000263202 CRISP2P16562 243 aa16.8■□□□□ 0.28
UFD1-201ENST00000263202 ODF3Q96PU9 254 aa16.8■□□□□ 0.28
UFD1-201ENST00000263202 A8MTW9 85 aa16.79■□□□□ 0.28
UFD1-201ENST00000263202 PRR9Q5T870 116 aa16.79■□□□□ 0.28
UFD1-201ENST00000263202 DAZAP1Q96EP5 407 aaKnown RBP16.79■□□□□ 0.28
UFD1-201ENST00000263202 SMCO4Q9NRQ5 59 aa16.79■□□□□ 0.28
UFD1-201ENST00000263202 C19orf73Q9NVV2 129 aa16.79■□□□□ 0.28
UFD1-201ENST00000263202 TRRAPQ9Y4A5 3859 aa16.78■□□□□ 0.28
UFD1-201ENST00000263202 FAM162BQ5T6X4 162 aa16.78■□□□□ 0.28
UFD1-201ENST00000263202 GATCO43716 136 aaKnown RBP16.77■□□□□ 0.28
UFD1-201ENST00000263202 SH2D1AO60880 128 aa16.77■□□□□ 0.28
UFD1-201ENST00000263202 AMTNQ6UX39 209 aa16.77■□□□□ 0.28
UFD1-201ENST00000263202 ZNF705GA8MUZ8 300 aaPredicted RBP16.77■□□□□ 0.27
UFD1-201ENST00000263202 P01737 135 aa16.77■□□□□ 0.27
UFD1-201ENST00000263202 CXorf65A6NEN9 183 aa16.76■□□□□ 0.27
UFD1-201ENST00000263202 J3KRW8 73 aa16.76■□□□□ 0.27
UFD1-201ENST00000263202 TUBA4BQ9H853 241 aa16.76■□□□□ 0.27
UFD1-201ENST00000263202 FABP5P3A8MUU1 101 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 KLLNB2CW77 178 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 GPX1P07203 203 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 LEPP41159 167 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 KIR3DS1Q14943 382 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 RPP21Q9H633 154 aaKnown RBP16.75■□□□□ 0.27
UFD1-201ENST00000263202 RBMY1BA6NDE4 496 aaKnown RBP16.75■□□□□ 0.27
UFD1-201ENST00000263202 RBMY1EA6NEQ0 496 aaKnown RBP16.75■□□□□ 0.27
UFD1-201ENST00000263202 PFN1P07737 140 aaKnown RBP16.75■□□□□ 0.27
UFD1-201ENST00000263202 RBMY1DP0C7P1 496 aaKnown RBP16.75■□□□□ 0.27
UFD1-201ENST00000263202 PRR31Q5SQ13 230 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 WFDC10AQ9H1F0 79 aa16.75■□□□□ 0.27
UFD1-201ENST00000263202 CA1P00915 261 aaPredicted RBP16.74■□□□□ 0.27
UFD1-201ENST00000263202 CLUHP3Q96NS8 147 aa16.74■□□□□ 0.27
UFD1-201ENST00000263202 Q6ZQT7 251 aa16.73■□□□□ 0.27
UFD1-201ENST00000263202 IL36BQ9NZH7 164 aa16.73■□□□□ 0.27
UFD1-201ENST00000263202 URGCP-MRPS24S4R325 110 aa16.73■□□□□ 0.27
UFD1-201ENST00000263202 M0R2Z0 102 aa16.73■□□□□ 0.27
UFD1-201ENST00000263202 RNASE4P34096 147 aaKnown RBP16.73■□□□□ 0.27
UFD1-201ENST00000263202 SPINK13Q1W4C9 94 aa16.73■□□□□ 0.27
UFD1-201ENST00000263202 STHQ8IWL8 128 aa16.73■□□□□ 0.27
UFD1-201ENST00000263202 TSPOP30536 169 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 CDKN1BP46527 198 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 RPL19P84098 196 aaKnown RBP16.72■□□□□ 0.27
UFD1-201ENST00000263202 CT83Q5H943 113 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 Q6AWC8 147 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 GTSCR1Q86UQ5 136 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 OR2D3Q8NGH3 330 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 YPEL4Q96NS1 127 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 IMMP2LQ96T52 175 aa16.72■□□□□ 0.27
UFD1-201ENST00000263202 OXLD1Q5BKU9 147 aa16.71■□□□□ 0.27
UFD1-201ENST00000263202 TRPT1Q86TN4 253 aaKnown RBP16.71■□□□□ 0.27
UFD1-201ENST00000263202 NOTCH3Q9UM47 2321 aa16.71■□□□□ 0.27
UFD1-201ENST00000263202 ELOBQ15370 118 aa16.7■□□□□ 0.26
UFD1-201ENST00000263202 C11orf21Q9P2W6 132 aa16.7■□□□□ 0.26
UFD1-201ENST00000263202 TRAV12-2A0A075B6T6 113 aa16.7■□□□□ 0.26
UFD1-201ENST00000263202 TRAV21A0A0B4J279 112 aa16.7■□□□□ 0.26
UFD1-201ENST00000263202 FXYD7P58549 80 aa16.7■□□□□ 0.26
UFD1-201ENST00000263202 SMIM27A0A1W2PRY6 76 aa16.69■□□□□ 0.26
UFD1-201ENST00000263202 C7orf71A4D174 169 aa16.69■□□□□ 0.26
UFD1-201ENST00000263202 TMEM189A5PLL7 270 aa16.69■□□□□ 0.26
UFD1-201ENST00000263202 S100PP25815 95 aa16.69■□□□□ 0.26
UFD1-201ENST00000263202 FAM3BP58499 235 aaPredicted RBP16.69■□□□□ 0.26
UFD1-201ENST00000263202 GFI1BQ5VTD9 330 aa16.69■□□□□ 0.26
UFD1-201ENST00000263202 TSKUQ8WUA8 353 aa16.69■□□□□ 0.26
UFD1-201ENST00000263202 A8MWL6 223 aa16.68■□□□□ 0.26
UFD1-201ENST00000263202 ORM1P02763 201 aa16.68■□□□□ 0.26
UFD1-201ENST00000263202 LINC01559Q495D7 138 aa16.68■□□□□ 0.26
UFD1-201ENST00000263202 KCNIP4Q6PIL6 250 aa16.68■□□□□ 0.26
UFD1-201ENST00000263202 DEFB125Q8N687 156 aa16.68■□□□□ 0.26
UFD1-201ENST00000263202 ZNF575Q86XF7 245 aa16.68■□□□□ 0.26
UFD1-201ENST00000263202 TRAV12-3A0A0B4J271 114 aa16.67■□□□□ 0.26
UFD1-201ENST00000263202 IGKV3D-20A0A0C4DH25 116 aa16.67■□□□□ 0.26
UFD1-201ENST00000263202 CRXO43186 299 aaPredicted RBP16.67■□□□□ 0.26
UFD1-201ENST00000263202 GZMBP10144 247 aa16.67■□□□□ 0.26
UFD1-201ENST00000263202 TCL1AP56279 114 aa16.67■□□□□ 0.26
UFD1-201ENST00000263202 TMSB15BA0A087X1C1 80 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 COLCA2A8K830 154 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 ZNF324O75467 553 aaPredicted RBP16.66■□□□□ 0.26
UFD1-201ENST00000263202 RIPPLY3P57055 190 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 TGIF2-C20orf24A0A0A6YYL0 155 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 Q8N1Y9 231 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 GTSF1Q8WW33 167 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 NEU1Q99519 415 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 GFRA4Q9GZZ7 299 aa16.66■□□□□ 0.26
UFD1-201ENST00000263202 ANK2Q01484 3957 aa16.65■□□□□ 0.26
UFD1-201ENST00000263202 A0A1W2PPQ1 181 aa16.65■□□□□ 0.26
UFD1-201ENST00000263202 CXCL1P09341 107 aa16.65■□□□□ 0.26
UFD1-201ENST00000263202 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.65■□□□□ 0.26
UFD1-201ENST00000263202 RPS20P60866 119 aaKnown RBP16.64■□□□□ 0.25
UFD1-201ENST00000263202 PYGO2Q9BRQ0 406 aa16.64■□□□□ 0.25
UFD1-201ENST00000263202 XKRY2A2RUG3 117 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 FAM231BA6NCW3 169 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 HIGD1CA8MV81 97 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 EGFEM1PQ0D2K5 195 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 NAT8BQ9UHF3 227 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 NAGKQ9UJ70 344 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 CMYA5Q8N3K9 4069 aa16.63■□□□□ 0.25
UFD1-201ENST00000263202 TRBV24-1A0A075B6N3 115 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms