RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 TMEM97Q5BJF2 176 aa7.81□□□□□ -1.16
LIG3-201ENST00000262327 Q6ZQT7 251 aa7.81□□□□□ -1.16
LIG3-201ENST00000262327 PRB1P04280 392 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 SPCS1Q9Y6A9 102 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 A0A0G2JLM5 398 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 FBLL1A6NHQ2 334 aaKnown RBP7.8□□□□□ -1.16
LIG3-201ENST00000262327 SPRY2O43597 315 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 BRI3O95415 125 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 IGHG4P01861 327 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 FGF6P10767 208 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 LYPD1Q8N2G4 141 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 USP24Q9UPU5 2620 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 CTSGP08311 255 aa7.8□□□□□ -1.16
LIG3-201ENST00000262327 TRBV6-1A0A0K0K1D8 114 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 H3BRM9 83 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 J3KRW8 73 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 SEC11AP67812 179 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 ZNF493Q6ZR52 646 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 IFI27L1Q96BM0 104 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 RAB1BQ9H0U4 201 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 SPG11Q96JI7 2443 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 C19orf84I3L1E1 186 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 HBDP02042 147 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 DTX2Q86UW9 622 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 OR5A1Q8NGJ0 315 aa7.79□□□□□ -1.16
LIG3-201ENST00000262327 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.78□□□□□ -1.16
LIG3-201ENST00000262327 NDUFA3O95167 84 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 C11orf71Q6IPW1 123 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 IL17RELQ6ZVW7 336 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 VMO1Q7Z5L0 202 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 RNF5Q99942 180 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 SPATA25Q9BR10 227 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 LINC01548A6NM66 108 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 RPL7P18124 248 aaKnown RBP7.78□□□□□ -1.16
LIG3-201ENST00000262327 Q6AWC8 147 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 ZNF562Q6V9R5 426 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 LY6G5BQ8NDX9 201 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 NPBQ8NG41 125 aa7.78□□□□□ -1.16
LIG3-201ENST00000262327 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 OR11H12B2RN74 326 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 ZFP36P26651 326 aaKnown RBP7.77□□□□□ -1.16
LIG3-201ENST00000262327 LEPP41159 167 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 OR11H1Q8NG94 326 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 OR11H6Q8NGC7 330 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 OR11H2Q8NH07 326 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 HIF1ANQ9NWT6 349 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 LINC00527Q9UJ94 153 aa7.77□□□□□ -1.16
LIG3-201ENST00000262327 IGKV2D-26A0A0A0MRZ7 120 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 A0A1B0GW15 77 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 G3V318 75 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 CLEC3BP05452 202 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 PDE6HQ13956 83 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 KIR3DS1Q14943 382 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 C15orf32Q32M92 178 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 A0A1W2PPM0 123 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 A1L4Q6 167 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 PRSS1P07477 247 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 ADAMTSL5Q6ZMM2 481 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 GATD1Q8NB37 220 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 RNF183Q96D59 192 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 RNF185Q96GF1 192 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 TIMD4Q96H15 378 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 U3KQK5 164 aa7.77□□□□□ -1.17
LIG3-201ENST00000262327 IGHV7-81A0A0B4J1V7 117 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 A6NDN8 102 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
LIG3-201ENST00000262327 TRGV3P03979 118 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 PRTN3P24158 256 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 ATP5G2Q06055 141 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 CLEC19AQ6UXS0 136 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 SRSF8Q9BRL6 282 aaKnown RBP7.76□□□□□ -1.17
LIG3-201ENST00000262327 MRPL16Q9NX20 251 aaKnown RBP7.76□□□□□ -1.17
LIG3-201ENST00000262327 HIVEP3Q5T1R4 2406 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 LGALS9BQ3B8N2 356 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 LGALS9CQ6DKI2 356 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 MTURNQ8N3F0 131 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 TTC9CQ8N5M4 171 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 C11orf21Q9P2W6 132 aa7.76□□□□□ -1.17
LIG3-201ENST00000262327 IGHV3OR16-10A0A075B7F0 116 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 ODF3BA8MYP8 253 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 PAX8Q06710 450 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 IGSF10Q6WRI0 2623 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 FAM110AQ9BQ89 295 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 UFC1Q9Y3C8 167 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 IGLC6P0CF74 106 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 GCSHP23434 173 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 DEFB1P60022 68 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 GTSCR1Q86UQ5 136 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 DEFB104AQ8WTQ1 72 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 K7ERJ3 54 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 TMEM158Q8WZ71 300 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 SPAG8Q99932 426 aaPredicted RBP7.75□□□□□ -1.17
LIG3-201ENST00000262327 FOXC2Q99958 501 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 MAP1LC3AQ9H492 121 aa7.75□□□□□ -1.17
LIG3-201ENST00000262327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.74□□□□□ -1.178e-8■■■■■ 63.4
LIG3-201ENST00000262327 A0A1W2PPR1 153 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms