RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TMEM238LA0A1B0GVL6 79 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 K7ERJ3 54 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 LMO4P61968 165 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 PSMG4Q5JS54 123 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 AAMDCQ9H7C9 122 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 ITLN2Q8WWU7 325 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-201ENST00000261963 SPATA25Q9BR10 227 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 CHAC1Q9BUX1 264 aa17.5■□□□□ 0.39
MCF2L-201ENST00000261963 PHLDA1Q8WV24 401 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-201ENST00000261963 C18orf15Q96N68 181 aa17.49■□□□□ 0.39
MCF2L-201ENST00000261963 BPESC1Q9GZL8 116 aa17.49■□□□□ 0.39
MCF2L-201ENST00000261963 TMEM213A2RRL7 107 aa17.49■□□□□ 0.39
MCF2L-201ENST00000261963 C19orf84I3L1E1 186 aa17.48■□□□□ 0.39
MCF2L-201ENST00000261963 SAA4P35542 130 aa17.48■□□□□ 0.39
MCF2L-201ENST00000261963 WFDC2Q14508 124 aa17.48■□□□□ 0.39
MCF2L-201ENST00000261963 Q5PR19 223 aa17.48■□□□□ 0.39
MCF2L-201ENST00000261963 LYZL1Q6UWQ5 148 aa17.48■□□□□ 0.39
MCF2L-201ENST00000261963 SMAD5-AS1Q9Y6J3 95 aa17.48■□□□□ 0.39
MCF2L-201ENST00000261963 RPL7P18124 248 aaKnown RBP17.48■□□□□ 0.39
MCF2L-201ENST00000261963 MRPL51Q4U2R6 128 aaKnown RBP17.48■□□□□ 0.39
MCF2L-201ENST00000261963 WFDC3Q8IUB2 231 aa17.47■□□□□ 0.39
MCF2L-201ENST00000261963 FAM110DQ8TAY7 271 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-201ENST00000261963 NHP2Q9NX24 153 aaKnown RBP17.47■□□□□ 0.39
MCF2L-201ENST00000261963 PRORYQ9H606 182 aa17.47■□□□□ 0.39
MCF2L-201ENST00000261963 IGHV3OR16-8A0A075B7F1 116 aa17.46■□□□□ 0.39
MCF2L-201ENST00000261963 IGKV2-40A0A087WW87 121 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-201ENST00000261963 IGKV2D-26A0A0A0MRZ7 120 aa17.46■□□□□ 0.39
MCF2L-201ENST00000261963 IGKV2D-40P01614 121 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-201ENST00000261963 RAB9AP51151 201 aa17.46■□□□□ 0.39
MCF2L-201ENST00000261963 IGHV3-35A0A0C4DH35 117 aa17.46■□□□□ 0.38
MCF2L-201ENST00000261963 E9PLD3 99 aa17.46■□□□□ 0.38
MCF2L-201ENST00000261963 ECSCRQ19T08 205 aa17.46■□□□□ 0.38
MCF2L-201ENST00000261963 ATP6V0E1O15342 81 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 IGHG4P01861 327 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 CKS1BP61024 79 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 ZNF502Q8TBZ5 544 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 CKS2P33552 79 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 KLK9Q2XQG4 91 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 C15orf32Q32M92 178 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 TM2D2Q9BX73 214 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 TTTY13Q9BZ97 58 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 KLK9Q9UKQ9 250 aa17.45■□□□□ 0.38
MCF2L-201ENST00000261963 SCGB2A2Q13296 93 aa17.44■□□□□ 0.38
MCF2L-201ENST00000261963 CEND1Q8N111 149 aa17.44■□□□□ 0.38
MCF2L-201ENST00000261963 SPAG8Q99932 426 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-201ENST00000261963 PRSS47A8MTI9 375 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 SCGB2A1O75556 95 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 NPYP01303 97 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 IGFL4Q6B9Z1 124 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 HHLA3Q9XRX5 114 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 PIEZO1Q92508 2521 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 TRBV25-1A0A075B6N4 114 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 TMSB15BA0A087X1C1 80 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 IGLL5B9A064 214 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 COX8CQ7Z4L0 72 aa17.43■□□□□ 0.38
MCF2L-201ENST00000261963 LINC01548A6NM66 108 aa17.42■□□□□ 0.38
MCF2L-201ENST00000261963 SH2D1AO60880 128 aa17.42■□□□□ 0.38
MCF2L-201ENST00000261963 HLA-DMBP28068 263 aa17.42■□□□□ 0.38
MCF2L-201ENST00000261963 ZMAT4Q9H898 229 aa17.42■□□□□ 0.38
MCF2L-201ENST00000261963 SPTAN1Q13813 2472 aaKnown RBP17.42■□□□□ 0.38
MCF2L-201ENST00000261963 SMKR1H3BMG3 65 aa17.42■□□□□ 0.38
MCF2L-201ENST00000261963 VPS13CQ709C8 3753 aa17.42■□□□□ 0.38
MCF2L-201ENST00000261963 CENPVL3A0A0U1RRI6 287 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 GNLYP22749 145 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 ODF1Q14990 250 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 ETDBQ3ZM63 59 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 SH2D6Q7Z4S9 175 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 ZNF479Q96JC4 524 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 PRR25Q96S07 402 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 ZFAND3Q9H8U3 227 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 G3V318 75 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 NPFFO15130 113 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 TCTEX1D4Q5JR98 221 aa17.41■□□□□ 0.38
MCF2L-201ENST00000261963 H3BMG7 143 aa17.4■□□□□ 0.38
MCF2L-201ENST00000261963 CLEC3BP05452 202 aa17.4■□□□□ 0.38
MCF2L-201ENST00000261963 Q8TAT8 98 aa17.4■□□□□ 0.38
MCF2L-201ENST00000261963 IGKCP01834 107 aa17.4■□□□□ 0.38
MCF2L-201ENST00000261963 SRSF1Q07955 248 aaKnown RBP eCLIP17.4■□□□□ 0.38
MCF2L-201ENST00000261963 ZFHX3Q15911 3703 aa17.39■□□□□ 0.37
MCF2L-201ENST00000261963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-201ENST00000261963 EVI2AP22794 236 aa17.39■□□□□ 0.37
MCF2L-201ENST00000261963 CCDC140Q96MF4 163 aa17.39■□□□□ 0.37
MCF2L-201ENST00000261963 PRSS1P07477 247 aa17.39■□□□□ 0.37
MCF2L-201ENST00000261963 ZNF80P51504 273 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-201ENST00000261963 GTSCR1Q86UQ5 136 aa17.38■□□□□ 0.37
MCF2L-201ENST00000261963 IGHV4-39P01824 125 aa17.38■□□□□ 0.37
MCF2L-201ENST00000261963 GAGE13Q4V321 117 aa17.38■□□□□ 0.37
MCF2L-201ENST00000261963 MAP1LC3AQ9H492 121 aa17.38■□□□□ 0.37
MCF2L-201ENST00000261963 PKD1L2Q7Z442 2459 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 CLPSL1A2RUU4 121 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 LEPP41159 167 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 TWIST1Q15672 202 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 ABCA2Q9BZC7 2435 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 K7EMI3 77 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 BUB3O43684 328 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 MRAP2Q96G30 205 aa17.37■□□□□ 0.37
MCF2L-201ENST00000261963 FCER1GP30273 86 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 C5orf56Q8N8D9 126 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 WFDC12Q8WWY7 111 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 HLA-DRB4P13762 266 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms