RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 SPRY2O43597 315 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 GCSHP23434 173 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 PDE6HQ13956 83 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 C15orf32Q32M92 178 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 SAP30O75446 220 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 PAX2Q02962 417 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
SFSWAP-201ENST00000261674 APCP25054 2843 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 KRTAP10-9P60411 292 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 KIR3DS1Q14943 382 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 CDKN1BP46527 198 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
SFSWAP-201ENST00000261674 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 A6NDN8 102 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 FABP5P3A8MUU1 101 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 G3V318 75 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 PRTN3P24158 256 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 SMAD7O15105 426 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 IGKV3-7A0A075B6H7 116 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 LGALS9BQ3B8N2 356 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 LGALS9CQ6DKI2 356 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 Q6ZQT7 251 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 OR11H6Q8NGC7 330 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 FOXC2Q99958 501 aa11.22□□□□□ -0.61
SFSWAP-201ENST00000261674 NDUFA3O95167 84 aa11.21□□□□□ -0.61
SFSWAP-201ENST00000261674 RIPPLY3P57055 190 aa11.21□□□□□ -0.61
SFSWAP-201ENST00000261674 GTSCR1Q86UQ5 136 aa11.21□□□□□ -0.61
SFSWAP-201ENST00000261674 TMEM160Q9NX00 188 aa11.21□□□□□ -0.61
SFSWAP-201ENST00000261674 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.62
SFSWAP-201ENST00000261674 FGF6P10767 208 aa11.21□□□□□ -0.62
SFSWAP-201ENST00000261674 SEC11AP67812 179 aa11.21□□□□□ -0.62
SFSWAP-201ENST00000261674 NPBQ8NG41 125 aa11.21□□□□□ -0.62
SFSWAP-201ENST00000261674 KLK15Q9H2R5 256 aa11.21□□□□□ -0.62
SFSWAP-201ENST00000261674 SCGB2A1O75556 95 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 TNFRSF6BO95407 300 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 COTL1Q14019 142 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 A0A0G2JLM5 398 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 FCER1GP30273 86 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 CCDC144NLQ6NUI1 221 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 LY6G5BQ8NDX9 201 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 AGRNO00468 2067 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
SFSWAP-201ENST00000261674 IGHG4P01861 327 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 IGKV2D-26A0A0A0MRZ7 120 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 K7ERU9 68 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 GTF2H5Q6ZYL4 71 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 BOD1L2Q8IYS8 172 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
SFSWAP-201ENST00000261674 TRGV3P03979 118 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 RPS20P60866 119 aaKnown RBP11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 DTX2Q86UW9 622 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 SETD2Q9BYW2 2564 aaPredicted RBP11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 HIF1ANQ9NWT6 349 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 U3KQK5 164 aa11.18□□□□□ -0.62
SFSWAP-201ENST00000261674 K7ERJ3 54 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 GOSR1O95249 250 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 COX6B1P14854 86 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 RPL11P62913 178 aaKnown RBP11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 HSD52Q0P140 79 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 ZC2HC1BQ5TFG8 222 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 RNF185Q96GF1 192 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 CCL19Q99731 98 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 C9orf118A6NHY6 69 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 BPESC1Q9GZL8 116 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
SFSWAP-201ENST00000261674 IGLC6P0CF74 106 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 DEFB1P60022 68 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 RPL24P83731 157 aaKnown RBP11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 TRAV40A0A0B4J280 105 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 ATP5J2P56134 94 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 GATD1Q8NB37 220 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 MTORP42345 2549 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 M0R1W7 72 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 Q8N9W7 124 aa11.16□□□□□ -0.62
SFSWAP-201ENST00000261674 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms