RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 GATA3P23771 443 aa11.3□□□□□ -0.6
MBD4-201ENST00000249910 VAMP3Q15836 100 aa11.3□□□□□ -0.6
MBD4-201ENST00000249910 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
MBD4-201ENST00000249910 ATP5L2Q7Z4Y8 100 aa11.3□□□□□ -0.6
MBD4-201ENST00000249910 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 IGKV3-7A0A075B6H7 116 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 GFRA4Q9GZZ7 299 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 MTORP42345 2549 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 SORL1Q92673 2214 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 AMTP48728 403 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 OR4X2Q8NGF9 303 aa11.29□□□□□ -0.6
MBD4-201ENST00000249910 SH2D1AO60880 128 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 GPX1P07203 203 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 ESDP10768 282 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 NTF3P20783 257 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 RAB9AP51151 201 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 NIT1Q86X76 327 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 SIGLECL1Q8N7X8 197 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
MBD4-201ENST00000249910 DEFB1P60022 68 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 DEFB113Q30KQ7 82 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 IGHV4-31P0DP07 118 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 EDN2P20800 178 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 PAFAH1B2P68402 229 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 FAM162BQ5T6X4 162 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 Q96MF0 132 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.61
MBD4-201ENST00000249910 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 FAM231BA6NCW3 169 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 RPL11P62913 178 aaKnown RBP11.26□□□□□ -0.61
MBD4-201ENST00000249910 Q6ZQT7 251 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 IL17RELQ6ZVW7 336 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 U3KQE9 123 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 TMEM189A5PLL7 270 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 TM4SF20Q53R12 229 aa11.26□□□□□ -0.61
MBD4-201ENST00000249910 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
MBD4-201ENST00000249910 CR1P17927 2039 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 A0A087X0K7 114 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 G3V4G9 280 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 HNRNPA3P51991 378 aaKnown RBP11.25□□□□□ -0.61
MBD4-201ENST00000249910 ZNF138P52744 262 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 KRTDAPP60985 99 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 LOXL1Q08397 574 aaPredicted RBP11.25□□□□□ -0.61
MBD4-201ENST00000249910 PMCHL1Q16048 86 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 USMG5Q96IX5 58 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 AGPAT4-IT1Q9H0P7 198 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 HAX1O00165 279 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
MBD4-201ENST00000249910 SRD5A1P18405 259 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 RNASEKQ6P5S7 137 aaKnown RBP11.25□□□□□ -0.61
MBD4-201ENST00000249910 C16orf92Q96LL3 132 aa11.25□□□□□ -0.61
MBD4-201ENST00000249910 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.24□□□□□ -0.61
MBD4-201ENST00000249910 TMEM213A2RRL7 107 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 ORM1P02763 201 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 AKAP9Q99996 3911 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 CFHR3Q02985 330 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 URB1-AS1Q96HZ7 61 aa11.24□□□□□ -0.61
MBD4-201ENST00000249910 NDUFA4O00483 81 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 SAP30O75446 220 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 Q6ZN92 141 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 SLC50A1Q9BRV3 221 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 NPFFR1Q9GZQ6 430 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 HSBP1O75506 76 aa11.23□□□□□ -0.61
MBD4-201ENST00000249910 J3QLI3 93 aa11.22□□□□□ -0.61
MBD4-201ENST00000249910 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
MBD4-201ENST00000249910 CSN3P07498 182 aa11.22□□□□□ -0.61
MBD4-201ENST00000249910 HINT1P49773 126 aaPredicted RBP11.22□□□□□ -0.61
MBD4-201ENST00000249910 TMEM190Q8WZ59 177 aa11.22□□□□□ -0.61
MBD4-201ENST00000249910 HECTD1Q9ULT8 2610 aa11.22□□□□□ -0.61
MBD4-201ENST00000249910 UNC79Q9P2D8 2635 aa11.22□□□□□ -0.61
MBD4-201ENST00000249910 H3BUA1 57 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 PSMB8P28062 276 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 CTRLP40313 264 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
MBD4-201ENST00000249910 A0A0G2JLM5 398 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 KLF5Q13887 457 aaPredicted RBP11.21□□□□□ -0.61
MBD4-201ENST00000249910 NDFIP1Q9BT67 221 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 RHPN1-AS1Q9BWJ2 59 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
MBD4-201ENST00000249910 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 RIGQ13278 110 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 KRTAP1-3Q8IUG1 177 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
MBD4-201ENST00000249910 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms