RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 RNF5Q99942 180 aa11.73□□□□□ -0.53
PMPCB-201ENST00000249269 PRO3102Q9H379 93 aa11.73□□□□□ -0.53
PMPCB-201ENST00000249269 SHISA9B4DS77 424 aa11.72□□□□□ -0.53
PMPCB-201ENST00000249269 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
PMPCB-201ENST00000249269 GAGE2AQ6NT46 116 aa11.72□□□□□ -0.53
PMPCB-201ENST00000249269 U3KQK5 164 aa11.72□□□□□ -0.53
PMPCB-201ENST00000249269 M0R2P5 195 aa11.72□□□□□ -0.53
PMPCB-201ENST00000249269 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
PMPCB-201ENST00000249269 CIARTQ8N365 385 aaPredicted RBP11.72□□□□□ -0.53
PMPCB-201ENST00000249269 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
PMPCB-201ENST00000249269 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 NCBP2LA6PVI3 153 aaKnown RBP11.71□□□□□ -0.53
PMPCB-201ENST00000249269 AVPP01185 164 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 CACNA1DQ01668 2161 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 K7EM74 188 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 PLA2G2CQ5R387 149 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 Q6ZS92 163 aa11.71□□□□□ -0.53
PMPCB-201ENST00000249269 OVOL3O00110 214 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 IGLV2-11P01706 119 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
PMPCB-201ENST00000249269 TMEM258P61165 79 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 C2orf91Q6ZV80 131 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 KAAG1Q9UBP8 84 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 DNAJC13O75165 2243 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 COL8A2P25067 703 aa11.7□□□□□ -0.54
PMPCB-201ENST00000249269 F11RQ9Y624 299 aaKnown RBP11.7□□□□□ -0.54
PMPCB-201ENST00000249269 E7EUB6 86 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 RBP4P02753 201 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 PDE6HQ13956 83 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 PRSS3P2Q8NHM4 247 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 CACNA1GO43497 2377 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 DYSFO75923 2080 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 HES3Q5TGS1 186 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 LINC00173Q6ZV60 143 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 ARRDC1-AS1Q9H2J1 176 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 CNTRLQ7Z7A1 2325 aa11.69□□□□□ -0.54
PMPCB-201ENST00000249269 NDUFB3O43676 98 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 PLAUP00749 431 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 EEF1AKMT3Q96AZ1 226 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 DOCK7Q96N67 2140 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 A0A1B0GWB2 263 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 PLGLAQ15195 96 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
PMPCB-201ENST00000249269 MRPL36Q9P0J6 103 aaKnown RBP11.68□□□□□ -0.54
PMPCB-201ENST00000249269 FAM19A4Q96LR4 140 aa11.67□□□□□ -0.54
PMPCB-201ENST00000249269 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
PMPCB-201ENST00000249269 TRBV19A0A075B6N1 114 aa11.67□□□□□ -0.54
PMPCB-201ENST00000249269 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
PMPCB-201ENST00000249269 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
PMPCB-201ENST00000249269 BRK1Q8WUW1 75 aa11.67□□□□□ -0.54
PMPCB-201ENST00000249269 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 WFDC11Q8NEX6 87 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 HIGD1BQ9P298 99 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 TP73-AS1Q9UF72 201 aa11.66□□□□□ -0.54
PMPCB-201ENST00000249269 A1L4Q6 167 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 RBAKDNA6NC62 111 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 SDK1Q7Z5N4 2213 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 H3BMG7 143 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 HBDP02042 147 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 ASIPP42127 132 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
PMPCB-201ENST00000249269 RAI1Q7Z5J4 1906 aaPredicted RBP11.65□□□□□ -0.55
PMPCB-201ENST00000249269 DSCAMO60469 2012 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 H3BRN7 92 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 CDX4O14627 284 aaPredicted RBP11.64□□□□□ -0.55
PMPCB-201ENST00000249269 FAM104BQ5XKR9 115 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 IGFL3Q6UXB1 125 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 Q9H8V8 135 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 LAMA1P25391 3075 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 SZT2Q5T011 3432 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 ZNF688P0C7X2 276 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 RRN3P1Q2M238 152 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 C12orf74Q32Q52 190 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 C10orf55Q5SWW7 151 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 ATP1A1-AS1Q5TC04 95 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 ANKRD29Q8N6D5 301 aa11.64□□□□□ -0.55
PMPCB-201ENST00000249269 I3L2K1 104 aa11.63□□□□□ -0.55
PMPCB-201ENST00000249269 BUB3O43684 328 aa11.63□□□□□ -0.55
PMPCB-201ENST00000249269 SPTBN5Q9NRC6 3674 aaKnown RBP11.63□□□□□ -0.55
PMPCB-201ENST00000249269 ARMS2P0C7Q2 107 aa11.63□□□□□ -0.55
PMPCB-201ENST00000249269 CRYGAP11844 174 aa11.63□□□□□ -0.55
PMPCB-201ENST00000249269 DAZ2Q13117 558 aaKnown RBP11.63□□□□□ -0.55
PMPCB-201ENST00000249269 DAZ4Q86SG3 579 aaKnown RBP11.63□□□□□ -0.55
PMPCB-201ENST00000249269 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
PMPCB-201ENST00000249269 DAZ3Q9NR90 486 aaKnown RBP11.63□□□□□ -0.55
PMPCB-201ENST00000249269 A0A0A0MQY5 61 aa11.62□□□□□ -0.55
PMPCB-201ENST00000249269 TRAV13-1A0A0B4J241 112 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms